RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 CCDC189A1A4V9 331 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 OR2A25A4D2G3 310 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 ZNF891A8MT65 544 aaPredicted RBP13.71□□□□□ -0.21
HDDC2-202ENST00000398153 MEN1O00255 615 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 ZSCAN9O15535 394 aaPredicted RBP13.71□□□□□ -0.21
HDDC2-202ENST00000398153 ZNF500O60304 480 aaPredicted RBP13.71□□□□□ -0.21
HDDC2-202ENST00000398153 SNRNP200O75643 2136 aaKnown RBP13.71□□□□□ -0.21
HDDC2-202ENST00000398153 WISP3O95389 354 aaPredicted RBP13.71□□□□□ -0.21
HDDC2-202ENST00000398153 ITGB2P05107 769 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 SAT1P21673 171 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 RORAP35398 523 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 RAB10P61026 200 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 ATP6V0D1P61421 351 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 ZKSCAN8Q15776 578 aaPredicted RBP13.71□□□□□ -0.21
HDDC2-202ENST00000398153 ARHGAP40Q5TG30 622 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 AGTRAPQ6RW13 159 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 SUSD1Q6UWL2 747 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 SBSNQ6UWP8 590 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 TMEM207Q6UWW9 146 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 VASH2Q86V25 355 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 MCATQ8IVS2 390 aaKnown RBP13.71□□□□□ -0.21
HDDC2-202ENST00000398153 CEP97Q8IW35 865 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 DSELQ8IZU8 1212 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 PROKR1Q8TCW9 393 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 CLIP3Q96DZ5 547 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 CATSPER2Q96P56 530 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 PLCD4Q9BRC7 762 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 DPH7Q9BTV6 452 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 WDR70Q9NW82 654 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 ARL15Q9NXU5 204 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 NINJ2Q9NZG7 142 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 TAC3Q9UHF0 121 aa13.71□□□□□ -0.21
HDDC2-202ENST00000398153 FITM1A5D6W6 292 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 KRT87PA6NCN2 255 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 ERVH48-1M5A8F1 160 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 TERTO14746 1132 aaKnown RBP13.7□□□□□ -0.22
HDDC2-202ENST00000398153 ZNF749O43361 778 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 PIAS1O75925 651 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 RAB40ALP0C0E4 278 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 EZRP15311 586 aaKnown RBP13.7□□□□□ -0.22
HDDC2-202ENST00000398153 TCN2P20062 427 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 AGXTP21549 392 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 PSMB5P28074 263 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 CRABP2P29373 138 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 DLSTP36957 453 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 HNMTP50135 292 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 EMP3P54852 163 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 RPS15P62841 145 aaKnown RBP13.7□□□□□ -0.22
HDDC2-202ENST00000398153 GRM7Q14831 915 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 PHKG1Q16816 387 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 PPP1R3AQ16821 1122 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 FAM214AQ32MH5 1076 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 CDKL4Q5MAI5 379 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 THEMIS2Q5TEJ8 643 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 ZNF425Q6IV72 752 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 CAPN13Q6MZZ7 669 aaPredicted RBP13.7□□□□□ -0.22
HDDC2-202ENST00000398153 RNF44Q7L0R7 432 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.7□□□□□ -0.22
HDDC2-202ENST00000398153 FBXL8Q96CD0 374 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 UBXN10Q96LJ8 280 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 UBL7Q96S82 380 aaPredicted RBP13.7□□□□□ -0.22
HDDC2-202ENST00000398153 ZFYVE21Q9BQ24 234 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 HAUS8Q9BT25 410 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 NDC1Q9BTX1 674 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 SGPP1Q9BX95 441 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 CDC42EP4Q9H3Q1 356 aaKnown RBP13.7□□□□□ -0.22
HDDC2-202ENST00000398153 PCMTD2Q9NV79 361 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 TMEM184CQ9NVA4 438 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 CTNNAL1Q9UBT7 734 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 CROTQ9UKG9 612 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 OARD1Q9Y530 152 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 CHD6Q8TD26 2715 aa13.7□□□□□ -0.22
HDDC2-202ENST00000398153 TXNDC9O14530 226 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 ANXA5P08758 320 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 TBPL1P62380 186 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 GPS2Q13227 327 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 TSTA3Q13630 321 aaPredicted RBP13.69□□□□□ -0.22
HDDC2-202ENST00000398153 PRAMEF13Q5VWM6 474 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 LCTLQ6UWM7 567 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 TRMT10CQ7L0Y3 403 aaKnown RBP13.69□□□□□ -0.22
HDDC2-202ENST00000398153 PAQR7Q86WK9 346 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 FAM20CQ8IXL6 584 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 SLC38A9Q8NBW4 561 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 PPFIBP2Q8ND30 876 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 OR56A3Q8NH54 315 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 ANKRD49Q8WVL7 239 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 MR1Q95460 341 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 CRELD1Q96HD1 420 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 SELENOSQ9BQE4 189 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 DHRS4Q9BTZ2 278 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 ACAT2Q9BWD1 397 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 NLNQ9BYT8 704 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 SPRTNQ9H040 489 aaPredicted RBP13.69□□□□□ -0.22
HDDC2-202ENST00000398153 TXLNGQ9NUQ3 528 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 NFU1Q9UMS0 254 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 KLHL20Q9Y2M5 609 aa13.69□□□□□ -0.22
HDDC2-202ENST00000398153 A0A087WUV0 522 aaPredicted RBP13.68□□□□□ -0.22
HDDC2-202ENST00000398153 IGKV1-8A0A0C4DH67 115 aa13.68□□□□□ -0.22
HDDC2-202ENST00000398153 TK2O00142 265 aa13.68□□□□□ -0.22
HDDC2-202ENST00000398153 HCRTR1O43613 425 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms