RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 NAA20P61599 178 aa20.53■□□□□ 0.88
FXN-202ENST00000396364 ASPHQ12797 758 aa20.53■□□□□ 0.88
FXN-202ENST00000396364 C16orf46Q6P387 395 aa20.53■□□□□ 0.88
FXN-202ENST00000396364 TMPRSS9Q7Z410 1059 aa20.53■□□□□ 0.88
FXN-202ENST00000396364 B3GNT8Q7Z7M8 397 aa20.53■□□□□ 0.88
FXN-202ENST00000396364 EXOC3L1Q86VI1 746 aa20.53■□□□□ 0.88
FXN-202ENST00000396364 THOC6Q86W42 341 aaKnown RBP20.53■□□□□ 0.88
FXN-202ENST00000396364 CHCHD4Q8N4Q1 142 aa20.53■□□□□ 0.88
FXN-202ENST00000396364 TBC1D19Q8N5T2 526 aa20.53■□□□□ 0.88
FXN-202ENST00000396364 PYCR2Q96C36 320 aa20.53■□□□□ 0.88
FXN-202ENST00000396364 FANCEQ9HB96 536 aa20.53■□□□□ 0.88
FXN-202ENST00000396364 DNAJC11Q9NVH1 559 aa20.53■□□□□ 0.88
FXN-202ENST00000396364 GPRC5BQ9NZH0 403 aa20.53■□□□□ 0.88
FXN-202ENST00000396364 SLC22A14Q9Y267 594 aa20.53■□□□□ 0.88
FXN-202ENST00000396364 PLLPQ9Y342 182 aa20.53■□□□□ 0.88
FXN-202ENST00000396364 SLC9B1P1A6NJY1 282 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 K7EPI3 171 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 CLGNO14967 610 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 KIF1CO43896 1103 aaKnown RBP20.52■□□□□ 0.88
FXN-202ENST00000396364 PLIN3O60664 434 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 SPAG7O75391 227 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 KATNA1O75449 491 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 NELFEP18615 380 aaKnown RBP20.52■□□□□ 0.88
FXN-202ENST00000396364 GNAZP19086 355 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 PSMB5P28074 263 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 GRK3P35626 688 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 MLLT3P42568 568 aaPredicted RBP20.52■□□□□ 0.88
FXN-202ENST00000396364 SEPHS1P49903 392 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 NFKB2Q00653 900 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 FOXC1Q12948 553 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 CDC16Q13042 620 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 TARDBPQ13148 414 aaKnown RBP eCLIP20.52■□□□□ 0.88
FXN-202ENST00000396364 PTGR2Q8N8N7 351 aaPredicted RBP20.52■□□□□ 0.88
FXN-202ENST00000396364 C19orf47Q8N9M1 422 aaKnown RBP20.52■□□□□ 0.88
FXN-202ENST00000396364 WDR36Q8NI36 951 aaKnown RBP20.52■□□□□ 0.88
FXN-202ENST00000396364 FLVCR1-AS1Q8TAF5 88 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 N4BP2L2Q92802 583 aaPredicted RBP20.52■□□□□ 0.88
FXN-202ENST00000396364 PHF21BQ96EK2 531 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 TRAPPC9Q96Q05 1148 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 CHRNA10Q9GZZ6 450 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 KCNK9Q9NPC2 374 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 BTRCQ9Y297 605 aa20.52■□□□□ 0.88
FXN-202ENST00000396364 IGHV5-51A0A0C4DH38 117 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 AGPSO00116 658 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 DYNC1I1O14576 645 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 CASC3O15234 703 aaKnown RBP20.51■□□□□ 0.87
FXN-202ENST00000396364 TM9SF1O15321 606 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 TAPBPO15533 448 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 ATP8B1O43520 1251 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 ZWINTO95229 277 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 PROCP04070 461 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 EPB42P16452 691 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 NPPBP16860 134 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 MAGP20916 626 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 PDX1P52945 283 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 ACY1Q03154 408 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 GPS2Q13227 327 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 PCBP2Q15366 365 aaKnown RBP eCLIP20.51■□□□□ 0.87
FXN-202ENST00000396364 PDK4Q16654 411 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 ZC3H12BQ5HYM0 836 aaKnown RBP20.51■□□□□ 0.87
FXN-202ENST00000396364 CDHR3Q6ZTQ4 885 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 RAB11FIP2Q7L804 512 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 ADCK2Q7Z695 626 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 TRIM73Q86UV7 250 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 SNX31Q8N9S9 440 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 RCBTB1Q8NDN9 531 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 TCP10LQ8TDR4 215 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 SLC41A2Q96JW4 573 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 TMEM79Q9BSE2 394 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 DPH7Q9BTV6 452 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 TMEM184CQ9NVA4 438 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 KLK4Q9Y5K2 254 aa20.51■□□□□ 0.87
FXN-202ENST00000396364 PTPRBP23467 1997 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 COL27A1Q8IZC6 1860 aaPredicted RBP20.5■□□□□ 0.87
FXN-202ENST00000396364 HMGB1P1B2RPK0 211 aaPredicted RBP20.5■□□□□ 0.87
FXN-202ENST00000396364 PRPF4O43172 522 aaKnown RBP eCLIP20.5■□□□□ 0.87
FXN-202ENST00000396364 TYROBPO43914 113 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 JMJD7P0C870 316 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 CPA3P15088 417 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 ST6GAL1P15907 406 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 CXCR2P25025 360 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 GRIA3P42263 894 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 MAGOHP61326 146 aaKnown RBP20.5■□□□□ 0.87
FXN-202ENST00000396364 KIAA1614Q5VZ46 1190 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 FIGLAQ6QHK4 219 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 ZYG11AQ6WRX3 759 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 BPHLQ86WA6 291 aaPredicted RBP20.5■□□□□ 0.87
FXN-202ENST00000396364 FAM129CQ86XR2 697 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 PPP4R1Q8TF05 950 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 SLC5A11Q8WWX8 675 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 ATP6V1G3Q96LB4 118 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 LOXL2Q9Y4K0 774 aa20.5■□□□□ 0.87
FXN-202ENST00000396364 A8MT66 165 aa20.49■□□□□ 0.87
FXN-202ENST00000396364 PLD2O14939 933 aa20.49■□□□□ 0.87
FXN-202ENST00000396364 H2AFYO75367 372 aaKnown RBP20.49■□□□□ 0.87
FXN-202ENST00000396364 GDF5P43026 501 aa20.49■□□□□ 0.87
FXN-202ENST00000396364 CCR8P51685 355 aa20.49■□□□□ 0.87
FXN-202ENST00000396364 RAB15P59190 212 aa20.49■□□□□ 0.87
FXN-202ENST00000396364 HERVK_113P63132 956 aa20.49■□□□□ 0.87
FXN-202ENST00000396364 RELAQ04206 551 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms