RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 A0A1W2PPV9 198 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 MANBAO00462 879 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 PIAS2O75928 621 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 NCF2P19878 526 aaPredicted RBP19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 HNF4AP41235 474 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 UBE2IP63279 158 aaKnown RBP19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 SIM2Q14190 667 aaPredicted RBP19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 ABRAXAS2Q15018 415 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 ZRSR2Q15696 482 aaKnown RBP19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 SPDYAQ5MJ70 313 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 CATSPEREQ5SY80 951 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 GRHL2Q6ISB3 625 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 SLCO4C1Q6ZQN7 724 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 C17orf64Q86WR6 236 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 ZBTB44Q8NCP5 570 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 TUBGCP3Q96CW5 907 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 PTCD3Q96EY7 689 aaKnown RBP19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 SRMSQ9H3Y6 488 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 ELOVL6Q9H5J4 265 aa19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 ZNF490Q9ULM2 529 aaPredicted RBP19.72■□□□□ 0.75
VCPKMT-202ENST00000395860 VPS4BO75351 444 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 ANXA6P08133 673 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 C1GALT1C1LP0DN25 315 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 CD22P20273 847 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 VARSP26640 1264 aaKnown RBP19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 PSMB5P28074 263 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 CASP2P42575 452 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 GPR18Q14330 331 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 TBCCQ15814 346 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 SGO1Q5FBB7 561 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 ATG9BQ674R7 924 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 NXPE4Q6UWF7 544 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 LARP4Q71RC2 724 aaKnown RBP eCLIP19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 MTFMTQ96DP5 389 aaKnown RBP19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 HBEGFQ99075 208 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 RIC8BQ9NVN3 520 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 OR6C2Q9NZP2 312 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 PCDHB11Q9Y5F2 797 aa19.71■□□□□ 0.75
VCPKMT-202ENST00000395860 SDK1Q7Z5N4 2213 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 LMO7DNF2Z398 122 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 HHEXQ03014 270 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 E2F2Q14209 437 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 XKR7Q5GH72 579 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 PRR23BQ6ZRT6 265 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 RNF165Q6ZSG1 346 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 CLNKQ7Z7G1 428 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 SELENOMQ8WWX9 145 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 USP7Q93009 1102 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 WDR34Q96EX3 536 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 EHD1Q9H4M9 534 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 AKTIPQ9H8T0 292 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 FARSBQ9NSD9 589 aaKnown RBP19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 FAM86C2PA6NEL3 165 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 CDH1P12830 882 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 PI4KAP42356 2102 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 ARRB1P49407 418 aaPredicted RBP19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 BNC1Q01954 994 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 DEFB133Q30KQ1 61 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 PAGE2BQ5JRK9 111 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 PEAR1Q5VY43 1037 aaPredicted RBP19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 CCDC121Q6ZUS5 278 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 GBP7Q8N8V2 638 aaPredicted RBP19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 ELF4Q99607 663 aaPredicted RBP19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 EFCAB11Q9BUY7 163 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 UCKL1Q9NWZ5 548 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 G3BP2Q9UN86 482 aaKnown RBP19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 PCDHGA2Q9Y5H1 932 aa19.7■□□□□ 0.74
VCPKMT-202ENST00000395860 SLC28A1O00337 649 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 PDYNP01213 254 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 CHRM5P08912 532 aaPredicted RBP19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 DPP6P42658 865 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 LAPTM5Q13571 262 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 FRG2Q64ET8 278 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 ICE2Q659A1 982 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 TMEM198Q66K66 360 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 RBM12BQ8IXT5 1001 aaKnown RBP19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 AVL9Q8NBF6 648 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 OR2A1Q8NGT9 310 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 OR2T11Q8NH01 316 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 CATSPER2Q96P56 530 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 FRG2BQ96QU4 278 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 SAR1AQ9NR31 198 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 ARMCX1Q9P291 453 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 PCDHGA11Q9Y5H2 935 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 KNL1Q8NG31 2342 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 ADAMTS9Q9P2N4 1935 aa19.69■□□□□ 0.74
VCPKMT-202ENST00000395860 ISM1B1AKI9 464 aa19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 H0YIV9 168 aa19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 RGS14O43566 566 aa19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 UBOX5O94941 541 aa19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 CFIP05156 583 aa19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 LBPP18428 481 aa19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 HOXD12P35452 270 aa19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 YBX1P67809 324 aaKnown RBP19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 UBAP2LQ14157 1087 aaKnown RBP19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 SLBPQ14493 270 aaKnown RBP eCLIP19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 HIST2H2ACQ16777 129 aaPredicted RBP19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 IMPG1Q17R60 797 aa19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 DUOXA1Q1HG43 343 aa19.68■□□□□ 0.74
VCPKMT-202ENST00000395860 HIST2H2AA3Q6FI13 130 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms