RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 MAGEC1O60732 1142 aa4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 ADRB2P07550 413 aa4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 IL11P20809 199 aa4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 SP100P23497 879 aaPredicted RBP4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 POLR2LP62875 67 aaKnown RBP4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 AIMP1Q12904 312 aaKnown RBP4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 LPAL2Q16609 132 aa4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 CENPVQ7Z7K6 275 aaPredicted RBP4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 SECISBP2LQ93073 1101 aaKnown RBP4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 ANKRD9Q96BM1 317 aaPredicted RBP4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 CENPTQ96BT3 561 aa4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 FAM71F1Q96KD3 344 aaPredicted RBP4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 NSMCE3Q96MG7 304 aa4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 NECTIN4Q96NY8 510 aa4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 CPNE1Q99829 537 aa4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 SLF1Q9BQI6 1058 aa4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 PRRG4Q9BZD6 226 aa4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 WWTR1Q9GZV5 400 aa4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 Q9H8V8 135 aa4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 CHKBQ9Y259 395 aa4.99□□□□□ -1.61
SNORA40.4-201ENST00000390971 CLDN4O14493 209 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 CRLF1O75462 422 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 TADA2AO75478 443 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 PRKAR1AP10644 381 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 CYP2A7P20853 494 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 MMP12P39900 470 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 OPRL1P41146 370 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 HNF4AP41235 474 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 VAMP7P51809 220 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 CYCSP99999 105 aaKnown RBP4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 RBPJQ06330 500 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 TMEM266Q2M3C6 531 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 TCTE1Q5JU00 501 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 ERMARDQ5T6L9 678 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 IL27RAQ6UWB1 636 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 OR6S1Q8NH40 331 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 APOBEC4Q8WW27 367 aaKnown RBP4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 UPF3AQ9H1J1 476 aaKnown RBP4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 TBC1D7Q9P0N9 293 aa4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 BCCIPQ9P287 314 aaKnown RBP eCLIP4.98□□□□□ -1.61
SNORA40.4-201ENST00000390971 CACNA1FO60840 1977 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 H0YAE9 185 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 SPRY1O43609 319 aaPredicted RBP4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 ATP5BP06576 529 aaKnown RBP4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 CSN3P07498 182 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 CD22P20273 847 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 LHCGRP22888 699 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 MC5RP33032 325 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 RAD52P43351 418 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 RAB28P51157 221 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 MYL7Q01449 175 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 NECTIN1Q15223 517 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 ZNF74Q16587 644 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 KRT39Q6A163 491 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 OR4A47Q6IF82 309 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 DOK6Q6PKX4 331 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 Q6ZRP5 223 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 PLPPR4Q7Z2D5 763 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 RYBPQ8N488 228 aaPredicted RBP4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 SLC4A11Q8NBS3 891 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 NOA1Q8NC60 698 aaKnown RBP4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 GATAD1Q8WUU5 269 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 HDAC11Q96DB2 347 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 LINC00615Q96LM1 132 aaPredicted RBP4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 C4orf45Q96LM5 186 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 CFAP57Q96MR6 1250 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 LPAR4Q99677 370 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 PANK4Q9NVE7 773 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 R4GN57 208 aa4.97□□□□□ -1.61
SNORA40.4-201ENST00000390971 CASTOR2A6NHX0 329 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 KRT33AO76009 404 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 ZSCAN5DPP0CG00 497 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 EPCAMP16422 314 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 UGT1A4P22310 534 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 HLA-FP30511 346 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 EFTUD2Q15029 972 aaKnown RBP eCLIP4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 NPTX1Q15818 432 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 TDRD5Q8NAT2 981 aaKnown RBP4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 KCTD6Q8NC69 237 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 SLC37A3Q8NCC5 494 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 OR7A2PQ8NGA2 310 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 OR10Q1Q8NGQ4 319 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 ZNF519Q8TB69 540 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 ROBO4Q8WZ75 1007 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 GTF3AQ92664 365 aaKnown RBP4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 ZNF486Q96H40 463 aaPredicted RBP4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 MUS81Q96NY9 551 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 LRRC3BQ96PB8 259 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 SPAG5Q96R06 1193 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 PKP2Q99959 881 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 CCDC3Q9BQI4 270 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 PYGO2Q9BRQ0 406 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 GSN-AS1Q9NRJ2 163 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 ANKEF1Q9NU02 776 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 TXNDC16Q9P2K2 825 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 TTLL3Q9Y4R7 772 aa4.96□□□□□ -1.62
SNORA40.4-201ENST00000390971 HMGB1P1B2RPK0 211 aaPredicted RBP4.95□□□□□ -1.62
SNORA40.4-201ENST00000390971 CELF2O95319 508 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms