RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ST8SIA6P61647 398 aa4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 UBXN1Q04323 297 aa4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 CACNG1Q06432 222 aa4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 SLC35D3Q5M8T2 416 aa4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 SPDYCQ5MJ68 293 aa4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 GPATCH11Q8N954 259 aa4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 OR52N5Q8NH56 324 aa4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 PSMA8Q8TAA3 256 aa4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 CENPTQ96BT3 561 aa4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 HNRNPABQ99729 332 aaKnown RBP4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 CDK19Q9BWU1 502 aa4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 MRPL9Q9BYD2 267 aaKnown RBP4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 LSG1Q9H089 658 aaKnown RBP4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 SDR39U1Q9NRG7 319 aaPredicted RBP4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 DNAJC17Q9NVM6 304 aaKnown RBP4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 ADPRHL2Q9NX46 363 aa4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 FBXL5Q9UKA1 691 aa4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 CHKBQ9Y259 395 aa4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 SNX5Q9Y5X3 404 aa4.98□□□□□ -1.61
RNU6-40P-201ENST00000384254 SDR42E2A6NKP2 422 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 LIFP15018 202 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 PSMB4P28070 264 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 CCND3P30281 292 aaPredicted RBP4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 CCKARP32238 428 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 CETN2P41208 172 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 HNF4AP41235 474 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 KCNJ1P48048 391 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 MAZP56270 477 aaKnown RBP4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 ERVFC1-1P60608 527 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 HERV-K104P61576 105 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 ASIC1P78348 528 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 TEFQ10587 303 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 TRAP1Q12931 704 aaKnown RBP4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 TAF10Q12962 218 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 FUT11Q495W5 492 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 C20orf194Q5TEA3 1177 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 KIAA1161Q6NSJ0 714 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 CYB5D1Q6P9G0 228 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 SLC27A1Q6PCB7 646 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 CTR9Q6PD62 1173 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 OR13C3Q8NGS6 347 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 NCOA7Q8NI08 942 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 UBE2Q2Q8WVN8 375 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 TM9SF4Q92544 642 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 TRMT61BQ9BVS5 477 aaKnown RBP4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 RNF121Q9H920 327 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 PPANQ9NQ55 473 aaKnown RBP4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 PDRG1Q9NUG6 133 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 DONSONQ9NYP3 566 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 FLRT3Q9NZU0 649 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 C19orf25Q9UFG5 118 aaPredicted RBP4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 ACAD8Q9UKU7 415 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 RIPK3Q9Y572 518 aa4.97□□□□□ -1.61
RNU6-40P-201ENST00000384254 GREB1LQ9C091 1923 aaPredicted RBP4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 TMEM150CB9EJG8 249 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 O00370 1275 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 ATP6V0E1O15342 81 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 PRAF2O60831 178 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 RAD51DO75771 328 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 GOSR1O95249 250 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 MOCS2O96007 188 aaPredicted RBP4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 PRSS1P07477 247 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 C8orf89P0DMQ9 161 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 EEF2P13639 858 aaKnown RBP4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 MARK3P27448 753 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 FRKP42685 505 aaPredicted RBP4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 CDX1P47902 265 aaPredicted RBP4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 GMPSP49915 693 aaPredicted RBP4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 CLDN15P56746 228 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 FOLH1Q04609 750 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 RASGEF1BQ0VAM2 473 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 C2orf76Q3KRA6 126 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 KBTBD12Q3ZCT8 623 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 ZNF672Q499Z4 452 aaPredicted RBP4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 IQCCQ4KMZ1 466 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 ZNF789Q5FWF6 425 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 TECRLQ5HYJ1 363 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 LYSMD4Q5XG99 296 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 PIGWQ7Z7B1 504 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 CROCCP3Q8IVE0 287 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 ZNF383Q8NA42 475 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 OR10Q1Q8NGQ4 319 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 P2RX5Q93086 422 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 PTP4A1Q93096 173 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 KLHL5Q96PQ7 755 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 PKP4Q99569 1192 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 SLC5A7Q9GZV3 580 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 FAM49AQ9H0Q0 323 aaPredicted RBP4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 SDCBP2Q9H190 292 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 ACTL8Q9H568 366 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 TLE6Q9H808 572 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 CWC25Q9NXE8 425 aaPredicted RBP4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 P4HTMQ9NXG6 502 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 TNNQ9UQP3 1299 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 RUVBL2Q9Y230 463 aaKnown RBP4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 ACEP12821 1306 aa4.96□□□□□ -1.62
RNU6-40P-201ENST00000384254 IGLV9-49A0A0B4J1Y8 123 aa4.95□□□□□ -1.62
RNU6-40P-201ENST00000384254 A0A0G2JLW4 131 aa4.95□□□□□ -1.62
RNU6-40P-201ENST00000384254 A0A1B0GUV1 79 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms