RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CAMKK1Q8N5S9 505 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 SLC38A4Q969I6 547 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 YME1L1Q96TA2 773 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 SPON2Q9BUD6 331 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 ZNF717Q9BY31 904 aaPredicted RBP13.49□□□□□ -0.25
SDC1-202ENST00000381150 ZYG11BQ9C0D3 744 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 CRISPLD1Q9H336 500 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 GPR83Q9NYM4 423 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 PRG3Q9Y2Y8 225 aaPredicted RBP13.49□□□□□ -0.25
SDC1-202ENST00000381150 SLC7A4O43246 635 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 PTTG1O95997 202 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 IGLV3-27P01718 113 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 STSP08842 583 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 HSPA7P48741 367 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 DAPP51397 102 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 RENBPP51606 427 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 PTPRRQ15256 657 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 FBXL22Q6P050 247 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 RAB43Q86YS6 212 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 SLC38A6Q8IZM9 456 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 C10orf111Q8N326 155 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 ARRDC2Q8TBH0 407 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 MYEOVQ96EZ4 313 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 CHD5Q8TDI0 1954 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 DRGXA6NNA5 263 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 C12orf71A8MTZ7 269 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 HAT1O14929 419 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 KERAO60938 352 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 SOX6P35712 828 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 RPP38P78345 283 aaKnown RBP13.49□□□□□ -0.25
SDC1-202ENST00000381150 ZNF235Q14590 738 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 LRRC26Q2I0M4 334 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 ZMAT1Q5H9K5 638 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 ARMCX4Q5H9R4 360 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 SLC43A3Q8NBI5 491 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 IL17RDQ8NFM7 739 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 OR4F6Q8NGB9 312 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 OR4K2Q8NGD2 314 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 OR6F1Q8NGZ6 308 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 SKA2Q8WVK7 121 aaPredicted RBP13.49□□□□□ -0.25
SDC1-202ENST00000381150 DNASE1L2Q92874 299 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 CLSTN3Q9BQT9 956 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 TTPALQ9BTX7 342 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 GPR62Q9BZJ7 368 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 CCDC177Q9NQR7 707 aaPredicted RBP13.49□□□□□ -0.25
SDC1-202ENST00000381150 SLC6A13Q9NSD5 602 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 ZIM2Q9NZV7 527 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 PCDHB5Q9Y5E4 795 aa13.49□□□□□ -0.25
SDC1-202ENST00000381150 EFCAB10A6NFE3 127 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 MROH6A6NGR9 719 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 SYN3O14994 580 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 NBNO60934 754 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 GRK5P34947 590 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 KRT6CP48668 564 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 RAB25P57735 213 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 EFEMP1Q12805 493 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 CBX2Q14781 532 aaPredicted RBP13.48□□□□□ -0.25
SDC1-202ENST00000381150 GPNMBQ14956 572 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 SLC14A2Q15849 920 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 SYT6Q5T7P8 510 aaPredicted RBP13.48□□□□□ -0.25
SDC1-202ENST00000381150 CACHD1Q5VU97 1274 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 RSPO2Q6UXX9 243 aaPredicted RBP13.48□□□□□ -0.25
SDC1-202ENST00000381150 PEX5LQ8IYB4 626 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 FUBP1Q96AE4 644 aaKnown RBP13.48□□□□□ -0.25
SDC1-202ENST00000381150 CNPPD1Q9BV87 410 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 METTL15A6NJ78 407 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 TNFRSF21O75509 655 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 WISP3O95389 354 aaPredicted RBP13.48□□□□□ -0.25
SDC1-202ENST00000381150 NDST3O95803 873 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 PGRP06401 933 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 FDXRP22570 491 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 CA5AP35218 305 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 HTR3AP46098 478 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 ZFP36L2P47974 494 aaKnown RBP13.48□□□□□ -0.25
SDC1-202ENST00000381150 TGM4P49221 684 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 CPSF6Q16630 551 aaKnown RBP eCLIP13.48□□□□□ -0.25
SDC1-202ENST00000381150 COQ5Q5HYK3 327 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 SLC44A2Q8IWA5 706 aaPredicted RBP13.48□□□□□ -0.25
SDC1-202ENST00000381150 ZNF548Q8NEK5 533 aaPredicted RBP13.48□□□□□ -0.25
SDC1-202ENST00000381150 JPH3Q8WXH2 748 aaPredicted RBP13.48□□□□□ -0.25
SDC1-202ENST00000381150 MFSD1Q9H3U5 465 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 ABCB9Q9NP78 766 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 MAT2BQ9NZL9 334 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 OSGIN1Q9UJX0 560 aa13.48□□□□□ -0.25
SDC1-202ENST00000381150 PCDHGA12O60330 932 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 SCO1O75880 301 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 CPSF4O95639 269 aaKnown RBP13.47□□□□□ -0.25
SDC1-202ENST00000381150 NTRK1P04629 796 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 RPLP0P05388 317 aaKnown RBP13.47□□□□□ -0.25
SDC1-202ENST00000381150 GPLD1P80108 840 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 CDC20Q12834 499 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 TTC23LQ6PF05 361 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 DOK6Q6PKX4 331 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 PAMR1Q6UXH9 720 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 VANGL1Q8TAA9 524 aaPredicted RBP13.47□□□□□ -0.25
SDC1-202ENST00000381150 RDH12Q96NR8 316 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 ARPC5LQ9BPX5 153 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 DPH2Q9BQC3 489 aaPredicted RBP13.47□□□□□ -0.25
SDC1-202ENST00000381150 CDADC1Q9BWV3 514 aa13.47□□□□□ -0.25
SDC1-202ENST00000381150 IPPKQ9H8X2 491 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms