RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 TSPAN18Q96SJ8 248 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 CDADC1Q9BWV3 514 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 YTHDF1Q9BYJ9 559 aaKnown RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 CD244Q9BZW8 370 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 MEAF6Q9HAF1 191 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 MED11Q9P086 117 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 FCF1Q9Y324 198 aaKnown RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 PCDHGA7Q9Y5G6 932 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 VCANP13611 3396 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 HTR3EA5X5Y0 456 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 TBC1D3BA6NDS4 549 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 FAM86C2PA6NEL3 165 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 H3BSH0 61 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 CEBPGP53567 150 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 FCGRTP55899 365 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 FOXM1Q08050 763 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 ZNF252P-AS1Q0IIN9 211 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 ST3GAL4Q11206 333 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 CEACAM7Q14002 265 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 POMZP3Q6PJE2 187 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 LBX2Q6XYB7 198 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 CTU1Q7Z7A3 348 aaKnown RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 KCTD5Q9NXV2 234 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 MARK1Q9P0L2 795 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 PADI3Q9ULW8 664 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 RNF6Q9Y252 685 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 GIT1Q9Y2X7 761 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 SPIN1Q9Y657 262 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 TLX2O43763 284 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 ECDO95905 644 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 ALPIP09923 528 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 CXCR2P25025 360 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 RFTN1Q14699 578 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 FNDC3BQ53EP0 1204 aaKnown RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 MED27Q6P2C8 311 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 TAC4Q86UU9 113 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 OR10G2Q8NGC3 310 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 NDNFQ8TB73 568 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 IRGQQ8WZA9 623 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 WRAP53Q9BUR4 548 aaKnown RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 ANKRD60Q9BZ19 345 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 PCDHGA11Q9Y5H2 935 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 PTCH2Q9Y6C5 1203 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 IRGMA1A4Y4 181 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 NEDD8-MDP1E9PL57 170 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 CDC7O00311 574 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 CLDN11O75508 207 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 SLITRK5O94991 958 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 PAFAH1B3Q15102 231 aaKnown RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 IFI44LQ53G44 452 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 LIPKQ5VXJ0 399 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 C22orf42Q6IC83 251 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 FAM171BQ6P995 826 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 CERS6Q6ZMG9 384 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 RTL4Q6ZR62 310 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 ZNF598Q86UK7 904 aaKnown RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 ATAD1Q8NBU5 361 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 C2CD4AQ8NCU7 369 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 DNAJB8Q8NHS0 232 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 ZNF431Q8TF32 576 aaPredicted RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 SORT1Q99523 831 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 SLC29A1Q99808 456 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 IMP3Q9NV31 184 aaKnown RBP4.09□□□□□ -1.75
BRCA2-201ENST00000380152 ARMC1Q9NVT9 282 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 MAN2B2Q9Y2E5 1009 aa4.09□□□□□ -1.75
BRCA2-201ENST00000380152 NRP1O14786 923 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 HCN1O60741 890 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 CHRNA1P02708 482 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 RHOQP17081 205 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 SMAD3P84022 425 aaKnown RBP4.09□□□□□ -1.76
BRCA2-201ENST00000380152 SLC3A1Q07837 685 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 PCBP2Q15366 365 aaKnown RBP eCLIP4.09□□□□□ -1.76
BRCA2-201ENST00000380152 C6orf141Q5SZD1 244 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 CEACAM20Q6UY09 585 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 INO80EQ8NBZ0 244 aaPredicted RBP4.09□□□□□ -1.76
BRCA2-201ENST00000380152 FAM46DQ8NEK8 389 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 GAL3ST1Q99999 423 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 MND1Q9BWT6 205 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 HAPLN2Q9GZV7 340 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 FKBPLQ9UIM3 349 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 UPK3BL1B0FP48 263 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 UPK3BL2E5RIL1 263 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 SLC9A3R1O14745 358 aaPredicted RBP4.09□□□□□ -1.76
BRCA2-201ENST00000380152 RFPL2O75678 378 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 UPK1BO75841 260 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 OR1D2P34982 312 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 WNT7BP56706 349 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 SNRPD2P62316 118 aaKnown RBP4.09□□□□□ -1.76
BRCA2-201ENST00000380152 C6orf136Q5SQH8 315 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 FRG2Q64ET8 278 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 IGFN1Q86VF2 1251 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 DTX3Q8N9I9 347 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 SLC37A3Q8NCC5 494 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 FRG2BQ96QU4 278 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 C1QTNF1Q9BXJ1 281 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 SEZ6LQ9BYH1 1024 aa4.09□□□□□ -1.76
BRCA2-201ENST00000380152 TTYH1Q9H313 450 aaPredicted RBP4.09□□□□□ -1.76
BRCA2-201ENST00000380152 MRPL17Q9NRX2 175 aaKnown RBP4.09□□□□□ -1.76
BRCA2-201ENST00000380152 ZIM2Q9NZV7 527 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms