RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SCELO95171 688 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 C6P13671 934 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 PRPS1L1P21108 318 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 ITPKAP23677 461 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 HRH2P25021 359 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 GPR1P46091 355 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 SLC6A11P48066 632 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 NRIP1P48552 1158 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 CCT8P50990 548 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 OR4D2P58180 307 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 ZXDAP98168 799 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 ABRQ12979 859 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 SMAD4Q13485 552 aaKnown RBP10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 ATP6AP1Q15904 470 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 ADRM1Q16186 407 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 XKR6Q5GH73 641 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 FAM46CQ5VWP2 391 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 ERN2Q76MJ5 926 aaKnown RBP10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 ASCL5Q7RTU5 278 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 SPRED1Q7Z699 444 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 AMIGO2Q86SJ2 522 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 TMEM132CQ8N3T6 1108 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 FBXL6Q8N531 539 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 C12orf76Q8N812 135 aaPredicted RBP10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 VN1R2Q8NFZ6 395 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 OR2T12Q8NG77 320 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 WDR20Q8TBZ3 569 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 SUSD6Q92537 303 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 FGF13Q92913 245 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 BIRC7Q96CA5 298 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 MTFMTQ96DP5 389 aaKnown RBP10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 CIB1Q99828 191 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 WRAP53Q9BUR4 548 aaKnown RBP10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 HDAC8Q9BY41 377 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 UGT2B28Q9BY64 529 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 ATG10Q9H0Y0 220 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 GORASP2Q9H8Y8 452 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 TRIM39Q9HCM9 518 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 RUVBL1Q9Y265 456 aaKnown RBP10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 ITM2BQ9Y287 266 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 TRBV5-3A0A0A0MS03 114 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 TMEM202A6NGA9 273 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 GSTA4O15217 222 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 KIF1CO43896 1103 aaKnown RBP10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 LILRB5O75023 590 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 SOD1P00441 154 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 PDGFBP01127 241 aaPredicted RBP10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 LDLRP01130 860 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 MTHFD1P11586 935 aaKnown RBP10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 SDC1P18827 310 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 IMPA1P29218 277 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 TRPC1P48995 793 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 MTPNP58546 118 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 YBX1P67809 324 aaKnown RBP10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 SRSF11Q05519 484 aaKnown RBP10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 NAE1Q13564 534 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 POM121L1PQ3SYA9 428 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 FAM98BQ52LJ0 330 aaKnown RBP10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 ZNF648Q5T619 568 aaPredicted RBP10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 RAET1GQ6H3X3 334 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 CAPN13Q6MZZ7 669 aaPredicted RBP10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 NUDT18Q6ZVK8 323 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 HM13Q8TCT9 377 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 CXorf40AQ8TE69 158 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 PYCR2Q96C36 320 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 CNBD2Q96M20 576 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 ZNF583Q96ND8 569 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 HHIPQ96QV1 700 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 FAM129BQ96TA1 746 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 PKP4Q99569 1192 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 BDH2Q9BUT1 245 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 MRPS26Q9BYN8 205 aaKnown RBP10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 ANKRD60Q9BZ19 345 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 DPEP2Q9H4A9 486 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 EPB41L1Q9H4G0 881 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 RPF2Q9H7B2 306 aaKnown RBP10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 HPS4Q9NQG7 708 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 ITM2CQ9NQX7 267 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 SPATA6Q9NWH7 488 aaPredicted RBP10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 VAPAQ9P0L0 249 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 THAP10Q9P2Z0 257 aaPredicted RBP10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 VPS29Q9UBQ0 182 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 CD207Q9UJ71 328 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 DLGAP4Q9Y2H0 992 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 NEUROG3Q9Y4Z2 214 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 PCDHGA11Q9Y5H2 935 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 KCNE2Q9Y6J6 123 aa10.15□□□□□ -0.78
POLR2J3-201ENST00000379340 SMIM31A0A1B0GVY4 71 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 ELOVL7A1L3X0 281 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 C7orf72A4D263 438 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 DFNA5O60443 496 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 PRAMEF4O60810 478 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 RASAL1O95294 804 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 RAP2AP10114 183 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 HLA-EP13747 358 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 NCK1P16333 377 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 IL1RNP18510 177 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 FCARP24071 287 aa10.14□□□□□ -0.79
POLR2J3-201ENST00000379340 OXTRP30559 389 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms