RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 UPB1Q9UBR1 384 aa8.78□□□□□ -1
UBR4-201ENST00000375218 SARDHQ9UL12 918 aa8.78□□□□□ -1
UBR4-201ENST00000375218 DIMT1Q9UNQ2 313 aaKnown RBP8.78□□□□□ -1
UBR4-201ENST00000375218 EIF3LQ9Y262 564 aaKnown RBP8.78□□□□□ -1
UBR4-201ENST00000375218 RIPK3Q9Y572 518 aa8.78□□□□□ -1
UBR4-201ENST00000375218 PCDHA2Q9Y5H9 948 aa8.78□□□□□ -1
UBR4-201ENST00000375218 DPPA5A6NC42 116 aa8.77□□□□□ -1
UBR4-201ENST00000375218 POLR1CO15160 346 aaPredicted RBP8.77□□□□□ -1
UBR4-201ENST00000375218 IFNA6P05013 189 aa8.77□□□□□ -1
UBR4-201ENST00000375218 ENO1P06733 434 aaKnown RBP8.77□□□□□ -1
UBR4-201ENST00000375218 SLC2A1P11166 492 aa8.77□□□□□ -1
UBR4-201ENST00000375218 INSRRP14616 1297 aa8.77□□□□□ -1
UBR4-201ENST00000375218 UGT1A4P22310 534 aa8.77□□□□□ -1
UBR4-201ENST00000375218 DNASE1P24855 282 aa8.77□□□□□ -1
UBR4-201ENST00000375218 PKLRP30613 574 aa8.77□□□□□ -1
UBR4-201ENST00000375218 UGT1A3P35503 534 aa8.77□□□□□ -1
UBR4-201ENST00000375218 UGT1A5P35504 534 aa8.77□□□□□ -1
UBR4-201ENST00000375218 ACTBP60709 375 aa8.77□□□□□ -1
UBR4-201ENST00000375218 ACTA2P62736 377 aa8.77□□□□□ -1
UBR4-201ENST00000375218 ACTG1P63261 375 aa8.77□□□□□ -1
UBR4-201ENST00000375218 ACTG2P63267 376 aa8.77□□□□□ -1
UBR4-201ENST00000375218 ACTC1P68032 377 aa8.77□□□□□ -1
UBR4-201ENST00000375218 ACTA1P68133 377 aa8.77□□□□□ -1
UBR4-201ENST00000375218 FLI1Q01543 452 aaPredicted RBP8.77□□□□□ -1
UBR4-201ENST00000375218 DRP2Q13474 957 aa8.77□□□□□ -1
UBR4-201ENST00000375218 TMEM35AQ53FP2 167 aa8.77□□□□□ -1
UBR4-201ENST00000375218 RAB41Q5JT25 222 aa8.77□□□□□ -1
UBR4-201ENST00000375218 ADCK2Q7Z695 626 aa8.77□□□□□ -1
UBR4-201ENST00000375218 NAGSQ8N159 534 aa8.77□□□□□ -1
UBR4-201ENST00000375218 NOA1Q8NC60 698 aaKnown RBP8.77□□□□□ -1
UBR4-201ENST00000375218 SUN3Q8TAQ9 357 aa8.77□□□□□ -1
UBR4-201ENST00000375218 RGMAQ96B86 450 aa8.77□□□□□ -1
UBR4-201ENST00000375218 SLCO5A1Q9H2Y9 848 aa8.77□□□□□ -1
UBR4-201ENST00000375218 FOXP1Q9H334 677 aaPredicted RBP8.77□□□□□ -1
UBR4-201ENST00000375218 IL26Q9NPH9 171 aa8.77□□□□□ -1
UBR4-201ENST00000375218 PLEKHM1Q9Y4G2 1056 aa8.77□□□□□ -1
UBR4-201ENST00000375218 FKTNO75072 461 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 ATE1O95260 518 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 IQCF3P0C7M6 154 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 CYP2C8P10632 490 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 SRCP12931 536 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 ZNF18P17022 549 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 UGT1A6P19224 532 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 MAGEB1P43366 347 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 SNX17Q15036 470 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 AMZ1Q400G9 498 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 SLC36A3Q495N2 470 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 IQCCQ4KMZ1 466 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 C5orf46Q6UWT4 87 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 KCTD8Q6ZWB6 473 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 BOD1L2Q8IYS8 172 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 GRHL3Q8TE85 626 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 HMGB4Q8WW32 186 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 MYDGFQ969H8 173 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 RFT1Q96AA3 541 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 EEF2KMTQ96G04 330 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 TUBB6Q9BUF5 446 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 KATNB1Q9BVA0 655 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 BEX2Q9BXY8 128 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 ASB8Q9H765 288 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 PLEKHA2Q9HB19 425 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 YAE1D1Q9NRH1 226 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 C19orf12Q9NSK7 152 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 NYAP2Q9P242 653 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 SHOC2Q9UQ13 582 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 ZFHX4Q86UP3 3567 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 OR52A4PA6NMU1 304 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 USP27XA6NNY8 438 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 CENPBD1B2RD01 187 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 TMEM238C9JI98 176 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 CLEC3AO75596 197 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 UPP2O95045 317 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 HOXA13P31271 388 aaPredicted RBP8.77□□□□□ -1.01
UBR4-201ENST00000375218 ALDH3B2P48448 385 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 HTRA4P83105 476 aaPredicted RBP8.77□□□□□ -1.01
UBR4-201ENST00000375218 OCA2Q04671 838 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 CACNG1Q06432 222 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 AASDHQ4L235 1098 aaPredicted RBP8.77□□□□□ -1.01
UBR4-201ENST00000375218 MTX3Q5HYI7 312 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 PRAMEF8Q5VWM4 474 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 KRT39Q6A163 491 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 TMIGD1Q6UXZ0 262 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 SMYD4Q8IYR2 804 aaPredicted RBP8.77□□□□□ -1.01
UBR4-201ENST00000375218 ZNF552Q9H707 407 aaPredicted RBP8.77□□□□□ -1.01
UBR4-201ENST00000375218 MYEF2Q9P2K5 600 aaKnown RBP8.77□□□□□ -1.01
UBR4-201ENST00000375218 F8W036 122 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 CCDC188H7C350 402 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 BUD23O43709 281 aaKnown RBP8.77□□□□□ -1.01
UBR4-201ENST00000375218 TBX19O60806 448 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 GABBR2O75899 941 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 AREGP15514 252 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 TACR3P29371 465 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 ATP5J2P56134 94 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 ORC2Q13416 577 aaPredicted RBP8.77□□□□□ -1.01
UBR4-201ENST00000375218 DRAP1Q14919 205 aaPredicted RBP8.77□□□□□ -1.01
UBR4-201ENST00000375218 TCHHL1Q5QJ38 904 aaPredicted RBP8.77□□□□□ -1.01
UBR4-201ENST00000375218 SPESP1Q6UW49 350 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 SETD3Q86TU7 594 aaPredicted RBP8.77□□□□□ -1.01
UBR4-201ENST00000375218 RTN4RL2Q86UN3 420 aa8.77□□□□□ -1.01
UBR4-201ENST00000375218 COMMD1Q8N668 190 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 292 ms