RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 MEAF6Q9HAF1 191 aa16.62■□□□□ 0.25
HLA-DMA-201ENST00000374843 PELI2Q9HAT8 420 aa16.62■□□□□ 0.25
HLA-DMA-201ENST00000374843 IL21RQ9HBE5 538 aa16.62■□□□□ 0.25
HLA-DMA-201ENST00000374843 DCTN4Q9UJW0 460 aa16.62■□□□□ 0.25
HLA-DMA-201ENST00000374843 RNF11Q9Y3C5 154 aa16.62■□□□□ 0.25
HLA-DMA-201ENST00000374843 PCDHB11Q9Y5F2 797 aa16.62■□□□□ 0.25
HLA-DMA-201ENST00000374843 KNL1Q8NG31 2342 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 TRPC5OSA6NMA1 111 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 BTN3A3O00478 584 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 PCDHGA12O60330 932 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 CRCPO75575 148 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 CCNDBP1O95273 360 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 FKBP9O95302 570 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 JUNP05412 331 aaKnown RBP16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 ZNF883P0CG24 379 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 JUPP14923 745 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 CD22P20273 847 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 HNF4AP41235 474 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 IDH3AP50213 366 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 BTKQ06187 659 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 TCF15Q12870 199 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 DOC2AQ14183 400 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 NR1D2Q14995 579 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 C10orf62Q5T681 223 aaPredicted RBP16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 THEMIS2Q5TEJ8 643 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 ICE2Q659A1 982 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 ZCCHC8Q6NZY4 707 aaKnown RBP16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 TMPRSS11BQ86T26 416 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 C17orf64Q86WR6 236 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 SLC35F3Q8IY50 421 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 ANKS4BQ8N8V4 417 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 CCDC197Q8NCU1 140 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 PRSS33Q8NF86 280 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 OR4E2Q8NGC2 313 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 OR4C6Q8NH72 309 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 JPH3Q8WXH2 748 aaPredicted RBP16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 USP7Q93009 1102 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 SLC22A18Q96BI1 424 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 C19orf60Q96EN9 201 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 PTCD3Q96EY7 689 aaKnown RBP16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 THOC1Q96FV9 657 aaKnown RBP16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 SEC16BQ96JE7 1060 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 EFCAB11Q9BUY7 163 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 TMEM120AQ9BXJ8 343 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 ARRDC1-AS1Q9H2J1 176 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 TUBB1Q9H4B7 451 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 SPHK1Q9NYA1 384 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 ARL2BPQ9Y2Y0 163 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 ENTPD2Q9Y5L3 495 aa16.61■□□□□ 0.25
HLA-DMA-201ENST00000374843 PI4KAP42356 2102 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 LAMA1P25391 3075 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 A0A0G2JND7 137 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 H0YIV9 168 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 SDHDO14521 159 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 PPM1DO15297 605 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 CHEK2O96017 543 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 RETP07949 1114 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 C1GALT1C1LP0DN25 315 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 ALPPL2P10696 532 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 PSMB5P28074 263 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 ARFIP2P53365 341 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 EPHA4P54764 986 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 ZNF33BQ06732 778 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 PRDX1Q06830 199 aaKnown RBP16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 TSTA3Q13630 321 aaPredicted RBP16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 PDCD2Q16342 344 aaPredicted RBP16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 XKR7Q5GH72 579 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 XKR6Q5GH73 641 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 CACNA2D3Q8IZS8 1091 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 C2orf73Q8N5S3 287 aaPredicted RBP16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 FAM181AQ8N9Y4 354 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 SUMF1Q8NBK3 374 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 OR2L3Q8NG85 312 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 OR4K1Q8NGD4 311 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 METTL6Q8TCB7 284 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 NUF2Q9BZD4 464 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 PITHD1Q9GZP4 211 aaPredicted RBP16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 TSC22D4Q9Y3Q8 395 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 KLK4Q9Y5K2 254 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 CACNA1HO95180 2353 aa16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 TDRD6O60522 2096 aaKnown RBP16.6■□□□□ 0.25
HLA-DMA-201ENST00000374843 SERTM1A2A2V5 107 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 OR5K3A6NET4 321 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 MANBAO00462 879 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 PIP5K1BO14986 540 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 KHNYNO15037 678 aaKnown RBP16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 NUDT21O43809 227 aaKnown RBP16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 KRT6AP02538 564 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 KRT6BP04259 564 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 CDH1P12830 882 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 ENGP17813 658 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 HRH2P25021 359 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 HMOX2P30519 316 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 ARL1P40616 181 aaPredicted RBP16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 CAPZBP47756 277 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 KRT6CP48668 564 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 HTR6P50406 440 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 REEP5Q00765 189 aa16.59■□□□□ 0.25
HLA-DMA-201ENST00000374843 TUBB3Q13509 450 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms