RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 FAM20CQ8IXL6 584 aa16.96■□□□□ 0.31
C9orf43-202ENST00000374165 KLHL29Q96CT2 875 aa16.96■□□□□ 0.31
C9orf43-202ENST00000374165 SGPP1Q9BX95 441 aa16.96■□□□□ 0.31
C9orf43-202ENST00000374165 IPPKQ9H8X2 491 aa16.96■□□□□ 0.31
C9orf43-202ENST00000374165 APOBEC2Q9Y235 224 aaKnown RBP16.96■□□□□ 0.31
C9orf43-202ENST00000374165 DIAPH2O60879 1101 aa16.96■□□□□ 0.3
C9orf43-202ENST00000374165 ATP5HO75947 161 aa16.96■□□□□ 0.3
C9orf43-202ENST00000374165 ZNF806P0C7X5 589 aa16.96■□□□□ 0.3
C9orf43-202ENST00000374165 SLC2A4P14672 509 aa16.96■□□□□ 0.3
C9orf43-202ENST00000374165 PEBP1P30086 187 aaKnown RBP16.96■□□□□ 0.3
C9orf43-202ENST00000374165 SERPINB5P36952 375 aa16.96■□□□□ 0.3
C9orf43-202ENST00000374165 ARHGAP19Q14CB8 494 aa16.96■□□□□ 0.3
C9orf43-202ENST00000374165 PLCL1Q15111 1095 aa16.96■□□□□ 0.3
C9orf43-202ENST00000374165 C14orf28Q4W4Y0 310 aa16.96■□□□□ 0.3
C9orf43-202ENST00000374165 EPGNQ6UW88 154 aa16.96■□□□□ 0.3
C9orf43-202ENST00000374165 ZNF438Q7Z4V0 828 aa16.96■□□□□ 0.3
C9orf43-202ENST00000374165 ADGRF3Q8IZF5 1079 aa16.96■□□□□ 0.3
C9orf43-202ENST00000374165 ARL8BQ9NVJ2 186 aa16.96■□□□□ 0.3
C9orf43-202ENST00000374165 NLGN3Q9NZ94 848 aa16.96■□□□□ 0.3
C9orf43-202ENST00000374165 BTBD3Q9Y2F9 522 aa16.96■□□□□ 0.3
C9orf43-202ENST00000374165 TMEM233B4DJY2 109 aa16.95■□□□□ 0.3
C9orf43-202ENST00000374165 CDX4O14627 284 aaPredicted RBP16.95■□□□□ 0.3
C9orf43-202ENST00000374165 SIGLEC6O43699 453 aa16.95■□□□□ 0.3
C9orf43-202ENST00000374165 CCDC22O60826 627 aa16.95■□□□□ 0.3
C9orf43-202ENST00000374165 SERPINA6P08185 405 aa16.95■□□□□ 0.3
C9orf43-202ENST00000374165 SLC9B1Q4ZJI4 515 aa16.95■□□□□ 0.3
C9orf43-202ENST00000374165 FAM91A1Q658Y4 838 aa16.95■□□□□ 0.3
C9orf43-202ENST00000374165 KIF2BQ8N4N8 673 aa16.95■□□□□ 0.3
C9orf43-202ENST00000374165 EID2Q8N6I1 236 aa16.95■□□□□ 0.3
C9orf43-202ENST00000374165 ARL10Q8N8L6 244 aa16.95■□□□□ 0.3
C9orf43-202ENST00000374165 OR2L8Q8NGY9 312 aa16.95■□□□□ 0.3
C9orf43-202ENST00000374165 OR4C6Q8NH72 309 aa16.95■□□□□ 0.3
C9orf43-202ENST00000374165 NEIL2Q969S2 332 aa16.95■□□□□ 0.3
C9orf43-202ENST00000374165 SRMSQ9H3Y6 488 aa16.95■□□□□ 0.3
C9orf43-202ENST00000374165 RNF215Q9Y6U7 377 aa16.95■□□□□ 0.3
C9orf43-202ENST00000374165 LY6G6EA0A0G2JKS1 128 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 HDAC3O15379 428 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 PCDHGA12O60330 932 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 EPB42P16452 691 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 NBL1P41271 181 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 FOXA1P55317 472 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 KCNJ2P63252 427 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 CAPN13Q6MZZ7 669 aaPredicted RBP16.94■□□□□ 0.3
C9orf43-202ENST00000374165 SYVN1Q86TM6 617 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 OR2A1Q8NGT9 310 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 SLC7A6OSQ96CW6 309 aaPredicted RBP16.94■□□□□ 0.3
C9orf43-202ENST00000374165 APOLD1Q96LR9 279 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 KCNA7Q96RP8 456 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 PARD6AQ9NPB6 346 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 CCDC177Q9NQR7 707 aaPredicted RBP16.94■□□□□ 0.3
C9orf43-202ENST00000374165 DNAJC11Q9NVH1 559 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 SPATA7Q9P0W8 599 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 TAC3Q9UHF0 121 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 U3KQA8 63 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 CAPN14A8MX76 684 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 PRICKLE3O43900 615 aaPredicted RBP16.94■□□□□ 0.3
C9orf43-202ENST00000374165 KATNA1O75449 491 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 SNUPNO95149 360 aaKnown RBP16.94■□□□□ 0.3
C9orf43-202ENST00000374165 TYRP1P17643 537 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 HK2P52789 917 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 ATXN3P54252 364 aaPredicted RBP16.94■□□□□ 0.3
C9orf43-202ENST00000374165 ERVPABLB-1P60509 514 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 PPP1CAP62136 330 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 LCP2Q13094 533 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 TRAF3Q13114 568 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 KRT72Q14CN4 511 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 SH2D4BQ5SQS7 431 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 LETMD1Q6P1Q0 360 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 LRRC70Q7Z2Q7 622 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 TREML1Q86YW5 311 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 KLHDC8AQ8IYD2 350 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 HMGCLL1Q8TB92 370 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 AGAP11Q8TF27 550 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 ZFPM2Q8WW38 1151 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 PTCD3Q96EY7 689 aaKnown RBP16.94■□□□□ 0.3
C9orf43-202ENST00000374165 MID1IP1Q9NPA3 183 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 SEMA4GQ9NTN9 838 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 LRIT1Q9P2V4 623 aa16.94■□□□□ 0.3
C9orf43-202ENST00000374165 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.94■□□□□ 0.3
C9orf43-202ENST00000374165 WDFY3Q8IZQ1 3526 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 OR6C74A6NCV1 312 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 E7EQ34 232 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 JUNP05412 331 aaKnown RBP16.93■□□□□ 0.3
C9orf43-202ENST00000374165 CHRM5P08912 532 aaPredicted RBP16.93■□□□□ 0.3
C9orf43-202ENST00000374165 TGM1P22735 817 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 SHMT2P34897 504 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 UBAP2LQ14157 1087 aaKnown RBP16.93■□□□□ 0.3
C9orf43-202ENST00000374165 RBBP7Q16576 425 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 CATSPEREQ5SY80 951 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 THEMIS2Q5TEJ8 643 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 CLEC6AQ6EIG7 209 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 ZCCHC8Q6NZY4 707 aaKnown RBP16.93■□□□□ 0.3
C9orf43-202ENST00000374165 CUZD1Q86UP6 607 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 SNX31Q8N9S9 440 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 OR10G6Q8NH81 332 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 SMPDL3AQ92484 453 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 RSC1A1Q92681 617 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 SH3KBP1Q96B97 665 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 PPP1R36Q96LQ0 422 aa16.93■□□□□ 0.3
C9orf43-202ENST00000374165 PHOX2BQ99453 314 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms