RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 PKP2Q99959 881 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 DPEP2Q9H4A9 486 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 WDR55Q9H6Y2 383 aaPredicted RBP19.9■□□□□ 0.78
SYNC-201ENST00000373484 COPS7BQ9H9Q2 264 aaPredicted RBP19.9■□□□□ 0.78
SYNC-201ENST00000373484 NCKIPSDQ9NZQ3 722 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 KCNK6Q9Y257 313 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 PRR19A6NJB7 356 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 CKMT1AP12532 417 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 CKMT2P17540 419 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 NSG1P42857 185 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 ALDH3B2P48448 385 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 IRF9Q00978 393 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 MS4A2Q01362 244 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 TRIM25Q14258 630 aaKnown RBP19.9■□□□□ 0.78
SYNC-201ENST00000373484 HACD2Q6Y1H2 254 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 CHSY3Q70JA7 882 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 ERI1Q8IV48 349 aaKnown RBP19.9■□□□□ 0.78
SYNC-201ENST00000373484 AFAP1L2Q8N4X5 818 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 ARL10Q8N8L6 244 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 HM13Q8TCT9 377 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 GLMNQ92990 594 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 CNBD2Q96M20 576 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 BIRC8Q96P09 236 aa19.9■□□□□ 0.78
SYNC-201ENST00000373484 MRPL1Q9BYD6 325 aaKnown RBP19.9■□□□□ 0.78
SYNC-201ENST00000373484 C20orf96Q9NUD7 363 aaPredicted RBP19.9■□□□□ 0.78
SYNC-201ENST00000373484 SPEGQ15772 3267 aa19.89■□□□□ 0.78
SYNC-201ENST00000373484 SPAARA0A1B0GVQ0 90 aa19.89■□□□□ 0.77
SYNC-201ENST00000373484 CHRNGP07510 517 aa19.89■□□□□ 0.77
SYNC-201ENST00000373484 SBK3P0C264 359 aa19.89■□□□□ 0.77
SYNC-201ENST00000373484 EPHA3P29320 983 aa19.89■□□□□ 0.77
SYNC-201ENST00000373484 TTPAP49638 278 aa19.89■□□□□ 0.77
SYNC-201ENST00000373484 PRLHRP49683 370 aa19.89■□□□□ 0.77
SYNC-201ENST00000373484 RHDQ02161 417 aa19.89■□□□□ 0.77
SYNC-201ENST00000373484 DCTN2Q13561 401 aaKnown RBP19.89■□□□□ 0.77
SYNC-201ENST00000373484 BEND7Q8N7W2 519 aaPredicted RBP19.89■□□□□ 0.77
SYNC-201ENST00000373484 GPR156Q8NFN8 814 aa19.89■□□□□ 0.77
SYNC-201ENST00000373484 LINC00615Q96LM1 132 aaPredicted RBP19.89■□□□□ 0.77
SYNC-201ENST00000373484 TOR4AQ9NXH8 423 aa19.89■□□□□ 0.77
SYNC-201ENST00000373484 ASXL3Q9C0F0 2248 aa19.89■□□□□ 0.77
SYNC-201ENST00000373484 RP1P56715 2156 aa19.89■□□□□ 0.77
SYNC-201ENST00000373484 DYTNA2CJ06 578 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 B4DGG1 531 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 GOLGA8TH3BQL2 631 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 ZNF701M0R085 212 aaPredicted RBP19.88■□□□□ 0.77
SYNC-201ENST00000373484 NOBOXO60393 691 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 KCNJ13O60928 360 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 POP7O75817 140 aaKnown RBP19.88■□□□□ 0.77
SYNC-201ENST00000373484 MYF5P13349 255 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 ACP1P24666 158 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 SIM1P81133 766 aaPredicted RBP19.88■□□□□ 0.77
SYNC-201ENST00000373484 DAB2P98082 770 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 DMPKQ09013 629 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 AMZ2Q86W34 360 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 SFTPA2Q8IWL1 248 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 LSMEM2Q8N112 164 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 CLDN19Q8N6F1 224 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 GPR150Q8NGU9 434 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 ZDHHC1Q8WTX9 485 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 CCDC126Q96EE4 140 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 PRPF18Q99633 342 aaKnown RBP19.88■□□□□ 0.77
SYNC-201ENST00000373484 EFHD1Q9BUP0 239 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 GRIP2Q9C0E4 1043 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 OCEL1Q9H607 264 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 TUBA8Q9NY65 449 aaPredicted RBP19.88■□□□□ 0.77
SYNC-201ENST00000373484 TBC1D29Q9UFV1 150 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 ZDHHC2Q9UIJ5 367 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 COPG1Q9Y678 874 aaKnown RBP19.88■□□□□ 0.77
SYNC-201ENST00000373484 CEPT1Q9Y6K0 416 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 OR1I1O60431 355 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 TRMUO75648 421 aaKnown RBP19.88■□□□□ 0.77
SYNC-201ENST00000373484 AP2A2O94973 939 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 ENO3P13929 434 aaPredicted RBP19.88■□□□□ 0.77
SYNC-201ENST00000373484 CDH2P19022 906 aaPredicted RBP19.88■□□□□ 0.77
SYNC-201ENST00000373484 ACADVLP49748 655 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 CDK9P50750 372 aaKnown RBP19.88■□□□□ 0.77
SYNC-201ENST00000373484 NR0B2Q15466 257 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 MRNIPQ6NTE8 343 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 LDB1Q86U70 411 aaPredicted RBP19.88■□□□□ 0.77
SYNC-201ENST00000373484 CROCCP3Q8IVE0 287 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 NAGSQ8N159 534 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 NUF2Q9BZD4 464 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 EVA1BQ9NVM1 165 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 GULP1Q9UBP9 304 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 ACOT9Q9Y305 439 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 AP4S1Q9Y587 144 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 PRSS21Q9Y6M0 314 aa19.88■□□□□ 0.77
SYNC-201ENST00000373484 A6NCN8 305 aa19.87■□□□□ 0.77
SYNC-201ENST00000373484 H6PDO95479 791 aa19.87■□□□□ 0.77
SYNC-201ENST00000373484 SLC7A1P30825 629 aa19.87■□□□□ 0.77
SYNC-201ENST00000373484 RANBP1P43487 201 aa19.87■□□□□ 0.77
SYNC-201ENST00000373484 RPIAP49247 311 aa19.87■□□□□ 0.77
SYNC-201ENST00000373484 DUSP3P51452 185 aaPredicted RBP19.87■□□□□ 0.77
SYNC-201ENST00000373484 NAGLUP54802 743 aa19.87■□□□□ 0.77
SYNC-201ENST00000373484 GALNT1Q10472 559 aaPredicted RBP19.87■□□□□ 0.77
SYNC-201ENST00000373484 SQLEQ14534 574 aa19.87■□□□□ 0.77
SYNC-201ENST00000373484 SMAD1Q15797 465 aaKnown RBP19.87■□□□□ 0.77
SYNC-201ENST00000373484 TYSND1Q2T9J0 566 aa19.87■□□□□ 0.77
SYNC-201ENST00000373484 LRRC8EQ6NSJ5 796 aa19.87■□□□□ 0.77
SYNC-201ENST00000373484 NEPROQ6NW34 567 aa19.87■□□□□ 0.77
SYNC-201ENST00000373484 DHRS4L2Q6PKH6 230 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms