RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 LRCH4O75427 683 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 SEC13P55735 322 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 IRF9Q00978 393 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 SCGB2A2Q13296 93 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 SLC22A16Q86VW1 577 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 YIPF7Q8N8F6 280 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 ZBTB8BQ8NAP8 495 aaPredicted RBP12.19□□□□□ -0.46
HCFC1-202ENST00000369984 PCDHAC1Q9H158 963 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 DCSTAMPQ9H295 470 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 PRNPP04156 253 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 CD48P09326 243 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 ATP5A1P25705 553 aaKnown RBP12.19□□□□□ -0.46
HCFC1-202ENST00000369984 ZNF45Q02386 682 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 RPA4Q13156 261 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 GRK1Q15835 563 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 ATAT1Q5SQI0 421 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 TMEM220Q6QAJ8 160 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 SLC37A3Q8NCC5 494 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 SLC7A6OSQ96CW6 309 aaPredicted RBP12.19□□□□□ -0.46
HCFC1-202ENST00000369984 GOLGA2P5Q9HBQ8 144 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 RUVBL1Q9Y265 456 aaKnown RBP12.19□□□□□ -0.46
HCFC1-202ENST00000369984 NOP16Q9Y3C1 178 aaKnown RBP12.19□□□□□ -0.46
HCFC1-202ENST00000369984 PCDHGA11Q9Y5H2 935 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 CCL22O00626 93 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 PLATP00750 562 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 FKBP1AP62942 108 aaKnown RBP12.18□□□□□ -0.46
HCFC1-202ENST00000369984 FBXO43Q4G163 708 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 STON2Q8WXE9 905 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 LRRC58Q96CX6 371 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 DUSP26Q9BV47 211 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 MKKSQ9NPJ1 570 aaPredicted RBP12.18□□□□□ -0.46
HCFC1-202ENST00000369984 KCNN3Q9UGI6 736 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 OAZ3Q9UMX2 235 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 UBIAD1Q9Y5Z9 338 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 WASHC1A8K0Z3 465 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 WASH3PC4AMC7 463 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 VEGFAP15692 232 aaPredicted RBP12.18□□□□□ -0.46
HCFC1-202ENST00000369984 CRISP3P54108 245 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 WASH2PQ6VEQ5 465 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 SAV1Q9H4B6 383 aaPredicted RBP12.18□□□□□ -0.46
HCFC1-202ENST00000369984 FANCFQ9NPI8 374 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 CTPS2Q9NRF8 586 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 GNG13Q9P2W3 67 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 ASXL3Q9C0F0 2248 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 TRIP11Q15643 1979 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 TTC3P53804 2025 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 PLGP00747 810 aaPredicted RBP12.18□□□□□ -0.46
HCFC1-202ENST00000369984 RHOQP17081 205 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 ENPP2Q13822 863 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 GARNL3Q5VVW2 1013 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 CEP97Q8IW35 865 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 HCAR2Q8TDS4 363 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 KLHL6Q8WZ60 621 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 CPNE2Q96FN4 548 aaPredicted RBP12.18□□□□□ -0.46
HCFC1-202ENST00000369984 ADAD1Q96M93 576 aaKnown RBP12.18□□□□□ -0.46
HCFC1-202ENST00000369984 CNTN6Q9UQ52 1028 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 NOX1Q9Y5S8 564 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 MMP3P08254 477 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 ITGA5P08648 1049 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 RGS6P49758 472 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 OR10G2Q8NGC3 310 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 GEMIN6Q8WXD5 167 aaKnown RBP12.18□□□□□ -0.46
HCFC1-202ENST00000369984 ITFG2Q969R8 447 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 SLC25A36Q96CQ1 311 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 DUS2Q9NX74 493 aaKnown RBP12.18□□□□□ -0.46
HCFC1-202ENST00000369984 DEC1Q9P2X7 70 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 P2RX2Q9UBL9 471 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 PCYT1BQ9Y5K3 369 aaPredicted RBP12.18□□□□□ -0.46
HCFC1-202ENST00000369984 C2orf92A0A1B0GVN3 265 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 RAB4AP20338 218 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 LCN1P31025 176 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 NDST2P52849 883 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 RPS14P62263 151 aaKnown RBP12.18□□□□□ -0.46
HCFC1-202ENST00000369984 ANKRD22Q5VYY1 191 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 SLC51AQ86UW1 340 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 DCAKDQ8WVC6 231 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 SSU72Q9NP77 194 aaKnown RBP12.18□□□□□ -0.46
HCFC1-202ENST00000369984 PRORSD1PA6NEY8 169 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 GABBR2O75899 941 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 RAB36O95755 333 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 VAMP1P23763 118 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 SMSP52788 366 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 UBXN11Q5T124 520 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 ZNF431Q8TF32 576 aaPredicted RBP12.18□□□□□ -0.46
HCFC1-202ENST00000369984 SEC14L1Q92503 715 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 CDK15Q96Q40 435 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 PCDHB18PQ96TA0 734 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 NELFAQ9H3P2 528 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 TNFRSF10DQ9UBN6 386 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 CMAHPQ9Y471 501 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 UBR1Q8IWV7 1749 aa12.18□□□□□ -0.46
HCFC1-202ENST00000369984 ILVBLA1L0T0 632 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 RPP14O95059 124 aaKnown RBP12.17□□□□□ -0.46
HCFC1-202ENST00000369984 TACR2P21452 398 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 PTGER3P43115 390 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 ZNF598Q86UK7 904 aaKnown RBP12.17□□□□□ -0.46
HCFC1-202ENST00000369984 DNAJB8Q8NHS0 232 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 UPF1Q92900 1129 aaKnown RBP eCLIP12.17□□□□□ -0.469e-10■■■■■ 41.6
HCFC1-202ENST00000369984 IL4I1Q96RQ9 567 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 MTFR1LQ9H019 292 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms