RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 NOS2P35228 1153 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 TBX4P57082 545 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 AP1S1P61966 158 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 NKX6-1P78426 367 aaPredicted RBP8.38□□□□□ -1.07
LCA5-201ENST00000369846 MC2RQ01718 297 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 NFIAQ12857 509 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 ARFRP1Q13795 201 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 NFATC4Q14934 902 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 TMEM126BQ8IUX1 230 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 OR4N4Q8N0Y3 316 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 GTPBP8Q8N3Z3 284 aaPredicted RBP8.38□□□□□ -1.07
LCA5-201ENST00000369846 KLHL36Q8N4N3 616 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 RELTQ969Z4 430 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 TMEM106CQ9BVX2 250 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 RNF121Q9H920 327 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 MEAF6Q9HAF1 191 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 POPDC2Q9HBU9 364 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 SLAMF7Q9NQ25 335 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 UFSP2Q9NUQ7 469 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 ASF1BQ9NVP2 202 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 DNAJC27Q9NZQ0 273 aa8.38□□□□□ -1.07
LCA5-201ENST00000369846 ARID1BQ8NFD5 2236 aaPredicted RBP8.38□□□□□ -1.07
LCA5-201ENST00000369846 MEIOCA2RUB1 952 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 MAGEB17A8MXT2 336 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 CXorf49A8MYA2 514 aaPredicted RBP8.37□□□□□ -1.07
LCA5-201ENST00000369846 TLR4O00206 839 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 TLX2O43763 284 aaPredicted RBP8.37□□□□□ -1.07
LCA5-201ENST00000369846 LRCH4O75427 683 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 IFNA17P01571 189 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 LAMP2P13473 410 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 TPSB2P20231 275 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 HSPA7P48741 367 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 DNASE1L1P49184 302 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 MECP2P51608 486 aaKnown RBP8.37□□□□□ -1.07
LCA5-201ENST00000369846 OR12D2P58182 307 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 IRF9Q00978 393 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 CEACAM7Q14002 265 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 TPSAB1Q15661 275 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 ASTE1Q2TB18 679 aaPredicted RBP8.37□□□□□ -1.07
LCA5-201ENST00000369846 LIPKQ5VXJ0 399 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 SLC30A6Q6NXT4 461 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 UNC5BQ8IZJ1 945 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 NLGN1Q8N2Q7 840 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 OR4L1Q8NH43 312 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 DCAKDQ8WVC6 231 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 CLIP3Q96DZ5 547 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 MGLLQ99685 303 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 RNF19AQ9NV58 838 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 RNF181Q9P0P0 153 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 SLC27A5Q9Y2P5 690 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 MRPS23Q9Y3D9 190 aaKnown RBP8.37□□□□□ -1.07
LCA5-201ENST00000369846 OR10H1Q9Y4A9 318 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 UPK1BO75841 260 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 TFAP2AP05549 437 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 F7P08709 466 aaPredicted RBP8.37□□□□□ -1.07
LCA5-201ENST00000369846 CAP2P40123 477 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 ALDH3B1P43353 468 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 XKP51811 444 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 PRKCZQ05513 592 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 ZNF674Q2M3X9 581 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 C14orf28Q4W4Y0 310 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 RETSATQ6NUM9 610 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 RFPL4BQ6ZWI9 263 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 OTOP1Q7RTM1 612 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 SLC16A9Q7RTY1 509 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 NT5DC4Q86YG4 428 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 GRAMD2AQ8IUY3 354 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 VWA5B2Q8N398 1253 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 NXPE2Q96DL1 559 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 OR2M4Q96R27 311 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 FGFBP2Q9BYJ0 223 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 AKTIPQ9H8T0 292 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 NECTIN3Q9NQS3 549 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 UXTQ9UBK9 157 aaPredicted RBP8.37□□□□□ -1.07
LCA5-201ENST00000369846 ZDHHC2Q9UIJ5 367 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 DDX60Q8IY21 1712 aaKnown RBP8.37□□□□□ -1.07
LCA5-201ENST00000369846 KLF11O14901 512 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 TGFB1I1O43294 461 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 NPHS1O60500 1241 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 ATE1O95260 518 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 SOX14O95416 240 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 IFNA21P01568 189 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 CKMP06732 381 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 MAPTP10636 758 aaKnown RBP8.37□□□□□ -1.07
LCA5-201ENST00000369846 CD53P19397 219 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 ALAS2P22557 587 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 TGM4P49221 684 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 DSTNP60981 165 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 VAMP2P63027 116 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 GRIN2CQ14957 1233 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 KIAA1614Q5VZ46 1190 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 ALG1LQ6GMV1 187 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 C1orf94Q6P1W5 598 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 C1orf186Q6ZWK4 172 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 TRAPPC5Q8IUR0 188 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 MAP4K3Q8IVH8 894 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 FAM217AQ8IXS0 508 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 ALDH16A1Q8IZ83 802 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 GDPD1Q8N9F7 314 aa8.37□□□□□ -1.07
LCA5-201ENST00000369846 LIN37Q96GY3 246 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms