RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PRDX1Q06830 199 aaKnown RBP13.38□□□□□ -0.27
TPM3-211ENST00000368531 ZIC1Q15915 447 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 CDKL4Q5MAI5 379 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 RAB11FIP2Q7L804 512 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 ADCK2Q7Z695 626 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 TMEM151AQ8N4L1 468 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 BANPQ8N9N5 519 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 AGBL5Q8NDL9 886 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 KLHL6Q8WZ60 621 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 RNF31Q96EP0 1072 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 PGM2Q96G03 612 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 OR4K3Q96R72 315 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 CMKLR1Q99788 373 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 DPH7Q9BTV6 452 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 SCNM1Q9BWG6 230 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 PITPNM3Q9BZ71 974 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 TWSG1Q9GZX9 223 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 ZNF768Q9H5H4 540 aaKnown RBP13.38□□□□□ -0.27
TPM3-211ENST00000368531 CNOT10Q9H9A5 744 aaKnown RBP13.38□□□□□ -0.27
TPM3-211ENST00000368531 SLC6A20Q9NP91 592 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 ACSS2Q9NR19 701 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 CUEDC1Q9NWM3 386 aaPredicted RBP13.38□□□□□ -0.27
TPM3-211ENST00000368531 SLC17A7Q9P2U7 560 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 SATB2Q9UPW6 733 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 DYRK1BQ9Y463 629 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 LOXL2Q9Y4K0 774 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 HEATR5BQ9P2D3 2071 aa13.38□□□□□ -0.27
TPM3-211ENST00000368531 CNOT1A5YKK6 2376 aaKnown RBP13.37□□□□□ -0.27
TPM3-211ENST00000368531 CCDC187A0A096LP49 1063 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 H7BY64 318 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 TOX3O15405 576 aaPredicted RBP13.37□□□□□ -0.27
TPM3-211ENST00000368531 MAP3K7O43318 606 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 PLIN3O60664 434 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 STK16O75716 305 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 SASH3O75995 380 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 CCNDBP1O95273 360 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 SIX3O95343 332 aaPredicted RBP13.37□□□□□ -0.27
TPM3-211ENST00000368531 PROCP04070 461 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 ANKRD34CP0C6C1 535 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 JMJD7P0C870 316 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 EBLN1P0CF75 366 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 CDH1P12830 882 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 CCL4P13236 92 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 NELFEP18615 380 aaKnown RBP13.37□□□□□ -0.27
TPM3-211ENST00000368531 ITIH1P19827 911 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 TAC1P20366 129 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 CCND1P24385 295 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 MLLT3P42568 568 aaPredicted RBP13.37□□□□□ -0.27
TPM3-211ENST00000368531 SLC6A12P48065 614 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 MAPK10P53779 464 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 HSD11B2P80365 405 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 FOXM1Q08050 763 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 SETDB1Q15047 1291 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 DEFB110Q30KQ9 67 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 FCRL6Q6DN72 434 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 LCTLQ6UWM7 567 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 C17orf64Q86WR6 236 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 C19orf47Q8N9M1 422 aaKnown RBP13.37□□□□□ -0.27
TPM3-211ENST00000368531 ARMC2Q8NEN0 867 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 TCP10LQ8TDR4 215 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 ARL8AQ96BM9 186 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 LIN37Q96GY3 246 aaPredicted RBP13.37□□□□□ -0.27
TPM3-211ENST00000368531 PRAP1Q96NZ9 151 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 HAUS8Q9BT25 410 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 CD244Q9BZW8 370 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 PCBD2Q9H0N5 130 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 STMN4Q9H169 189 aaPredicted RBP13.37□□□□□ -0.27
TPM3-211ENST00000368531 FAM60AQ9NP50 221 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 PDE7BQ9NP56 450 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 KCNK9Q9NPC2 374 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 DNAJC11Q9NVH1 559 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 SENP1Q9P0U3 644 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 OPTCQ9UBM4 332 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 PISDQ9UG56 409 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 ANGPTL3Q9Y5C1 460 aa13.37□□□□□ -0.27
TPM3-211ENST00000368531 CFAP54Q96N23 3096 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 IGKV1-8A0A0C4DH67 115 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 A0A1W2PNU3 283 aaPredicted RBP13.36□□□□□ -0.27
TPM3-211ENST00000368531 A8MT66 165 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 TARM1B6A8C7 271 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 HGSO14964 777 aaPredicted RBP13.36□□□□□ -0.27
TPM3-211ENST00000368531 KLK8O60259 260 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 DLX3O60479 287 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 IPO13O94829 963 aaKnown RBP13.36□□□□□ -0.27
TPM3-211ENST00000368531 MYL2P10916 166 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 FGF3P11487 239 aaPredicted RBP13.36□□□□□ -0.27
TPM3-211ENST00000368531 FOLR1P15328 257 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 EEF1DP29692 281 aaKnown RBP13.36□□□□□ -0.27
TPM3-211ENST00000368531 GGT5P36269 586 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 ETV5P41161 510 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 MAGOHP61326 146 aaKnown RBP13.36□□□□□ -0.27
TPM3-211ENST00000368531 MEF2AQ02078 507 aaPredicted RBP13.36□□□□□ -0.27
TPM3-211ENST00000368531 COL9A2Q14055 689 aaPredicted RBP13.36□□□□□ -0.27
TPM3-211ENST00000368531 GPR19Q15760 415 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 CCDC153Q494R4 210 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 TNFAIP8L3Q5GJ75 292 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 CATSPEREQ5SY80 951 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 TMTC4Q5T4D3 741 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 TMPRSS11BQ86T26 416 aa13.36□□□□□ -0.27
TPM3-211ENST00000368531 KMT5CQ86Y97 462 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms