RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 SUV39H1O43463 412 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 PRSS23O95084 383 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 TRBC1P01850 177 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 CSF2P04141 144 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 HTR1AP08908 422 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 ISL1P61371 349 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 VLDLRP98155 873 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 CACNG1Q06432 222 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 TUBA3CQ13748 450 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 SETMARQ53H47 684 aaPredicted RBP10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 INO80DQ53TQ3 878 aaPredicted RBP10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 TPRG1LQ5T0D9 272 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 MFSD14CQ5VZR4 134 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 VASH1Q7L8A9 365 aaPredicted RBP10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 CACUL1Q86Y37 369 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 GPR65Q8IYL9 337 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 CAMKK1Q8N5S9 505 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 GTF3C2Q8WUA4 911 aaPredicted RBP10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 MYO19Q96H55 970 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 VPS35Q96QK1 796 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 MAGEH1Q9H213 219 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 DSN1Q9H410 356 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 RAD18Q9NS91 495 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 IL37Q9NZH6 218 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 SAMD4AQ9UPU9 718 aaKnown RBP10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 PCDHB7Q9Y5E2 793 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 TNFRSF11BO00300 401 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 IDH3BO43837 385 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 INHBBP09529 407 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 CKMT1AP12532 417 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 CHI3L1P36222 383 aaPredicted RBP10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 ZNF140P52738 457 aaPredicted RBP10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 TCEA2Q15560 299 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 SYTL3Q4VX76 610 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 PTRH1Q86Y79 214 aaKnown RBP10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 KCNJ9Q92806 393 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 DUS3LQ96G46 650 aaKnown RBP10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 TP63Q9H3D4 680 aaPredicted RBP10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 C8orf4Q9NR00 106 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 TOR4AQ9NXH8 423 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 CDH7Q9ULB5 785 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 BTBD3Q9Y2F9 522 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 DHRS7Q9Y394 339 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 PRKAB1Q9Y478 270 aa10.73□□□□□ -0.69
NECTIN4-201ENST00000368012 EFCAB10A6NFE3 127 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 UPK1AO00322 258 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 SMAD6O43541 496 aaKnown RBP10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 SOX14O95416 240 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 INPP1P49441 399 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 DAPP51397 102 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 CYP4F8P98187 520 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 SELENBP1Q13228 472 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 SLC14A1Q13336 389 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 NAE1Q13564 534 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 ZNF404Q494X3 552 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 PLEKHG7Q6ZR37 379 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 CYP2U1Q7Z449 544 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 SLC34A3Q8N130 599 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 DEPDC4Q8N2C3 294 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 STK40Q8N2I9 435 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 AADATQ8N5Z0 425 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 WDR36Q8NI36 951 aaKnown RBP10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 VANGL1Q8TAA9 524 aaPredicted RBP10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 AUTS2Q8WXX7 1259 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 MS4A4AQ96JQ5 239 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 CD244Q9BZW8 370 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 C11orf16Q9NQ32 467 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 GIMAP4Q9NUV9 329 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 ACSL6Q9UKU0 697 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 PCDHB8Q9UN66 801 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 PMF1-BGLAPU3KQ54 211 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 C2orf78A6NCI8 922 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 MAGEB17A8MXT2 336 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 HAS3O00219 553 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 IGLV3-25P01717 112 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 PTNP21246 168 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 HOXD9P28356 352 aaPredicted RBP10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 HOXD11P31277 338 aaPredicted RBP10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 FEN1P39748 380 aaKnown RBP10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 CSKP41240 450 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 ALDH7A1P49419 539 aaKnown RBP10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 MVKQ03426 396 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 CSTF3Q12996 717 aaKnown RBP10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 RIMKLAQ8IXN7 391 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 COLGALT2Q8IYK4 626 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 ALDH16A1Q8IZ83 802 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 ARL14EPQ8N8R7 260 aaPredicted RBP10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 VPS37AQ8NEZ2 397 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 ATL1Q8WXF7 558 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 SLC39A13Q96H72 371 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 ARHGAP39Q9C0H5 1083 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 TIGARQ9NQ88 270 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 SNTG1Q9NSN8 517 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 SNX6Q9UNH7 406 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 PCDHGA10Q9Y5H3 936 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 TMEM88BA6NKF7 163 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 KRT20P35900 424 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 MEF2AQ02078 507 aaPredicted RBP10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 ARMCX4Q5H9R4 360 aa10.72□□□□□ -0.69
NECTIN4-201ENST00000368012 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms