RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 TBX5Q99593 518 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 ERVK-6Q9BXR3 956 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 SLC5A7Q9GZV3 580 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 C1orf21Q9H246 121 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 SEPT4O43236 478 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 CYP3A5P20815 502 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 AGTR1P30556 359 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 MAGEA8P43361 318 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 SPIN4Q56A73 249 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 SSX6Q7RTT6 188 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 ANKS1BQ7Z6G8 1248 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 SLC22A18Q96BI1 424 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 NARSO43776 548 aaKnown RBP16.37■□□□□ 0.21
NID1-202ENST00000366595 TPST2O60704 377 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 LRCH4O75427 683 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 RPS2P15880 293 aaKnown RBP16.37■□□□□ 0.21
NID1-202ENST00000366595 MSR1P21757 451 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 GBE1Q04446 702 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 FGL1Q08830 312 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 CHAF1BQ13112 559 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 ITPK1Q13572 414 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 ZNF181Q2M3W8 571 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 HFE2Q6ZVN8 426 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 MOB2Q70IA6 237 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 IQCHQ86VS3 1027 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 FAM156AQ8NDB6 213 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 LRRC58Q96CX6 371 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 KLHL15Q96M94 604 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 EVLQ9UI08 416 aaPredicted RBP16.37■□□□□ 0.21
NID1-202ENST00000366595 A0A1W2PQH9 124 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 NEDD8-MDP1E9PL57 170 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 CILPO75339 1184 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 GNMTQ14749 295 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 CHERPQ8IWX8 916 aaKnown RBP16.37■□□□□ 0.21
NID1-202ENST00000366595 GATAD2BQ8WXI9 593 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 CGREF1Q99674 301 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 ZCCHC3Q9NUD5 404 aaKnown RBP16.37■□□□□ 0.21
NID1-202ENST00000366595 HECW2Q9P2P5 1572 aa16.37■□□□□ 0.21
NID1-202ENST00000366595 E2F3O00716 465 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 NCBP2P52298 156 aaKnown RBP eCLIP16.36■□□□□ 0.21
NID1-202ENST00000366595 ST3GAL3Q11203 375 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 UBXN11Q5T124 520 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 MEDAGQ5VYS4 303 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 ADGRA1Q86SQ6 560 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 C12orf29Q8N999 325 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 MFSD3Q96ES6 412 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.36■□□□□ 0.21
NID1-202ENST00000366595 SLC27A5Q9Y2P5 690 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 IFT52Q9Y366 437 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 BCORL1Q5H9F3 1711 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 A0A0G2JMP0 313 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 H0YGN5 161 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 SSX4O60224 188 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 MYCLP1P12525 358 aaPredicted RBP16.36■□□□□ 0.21
NID1-202ENST00000366595 GABRR2P28476 465 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 GRIA2P42262 883 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 CAV3P56539 151 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
NID1-202ENST00000366595 CENPSQ8N2Z9 138 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 OR4M2Q8NGB6 313 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 TTPALQ9BTX7 342 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 PBDC1Q9BVG4 233 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 ITM2CQ9NQX7 267 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 OSER1Q9NX31 292 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 MKS1Q9NXB0 559 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 ACTR3BQ9P1U1 418 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 NRXN1Q9ULB1 1477 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 CLDN5O00501 218 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 IFNA5P01569 189 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 MT-ND2P03891 347 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 MT-ND5P03915 603 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 HADHBP55084 474 aaKnown RBP16.36■□□□□ 0.21
NID1-202ENST00000366595 C1QTNF8P60827 252 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 ABRAXAS2Q15018 415 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 SNX29P2Q8IUI4 249 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 GLIS3Q8NEA6 775 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 ZNF717Q9BY31 904 aaPredicted RBP16.36■□□□□ 0.21
NID1-202ENST00000366595 SLC29A3Q9BZD2 475 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 NPPAP01160 153 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 IFNA4P05014 189 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 CTNNB1P35222 781 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 SLC13A2Q13183 592 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 TNFAIP8L2Q6P589 184 aaPredicted RBP16.36■□□□□ 0.21
NID1-202ENST00000366595 ZER1Q7Z7L7 766 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 POGLUT1Q8NBL1 392 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 OTUB2Q96DC9 234 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 KCNC2Q96PR1 638 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 CYP2S1Q96SQ9 504 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 CENPMQ9NSP4 180 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 JCADQ9P266 1359 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 GLUD1P00367 558 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 TMBIM6P55061 237 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 DSC2Q02487 901 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 LRRN4Q8WUT4 740 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 GIMAP5Q96F15 307 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 CNTN3Q9P232 1028 aa16.36■□□□□ 0.21
NID1-202ENST00000366595 CAPN14A8MX76 684 aa16.35■□□□□ 0.21
NID1-202ENST00000366595 CLIC1O00299 241 aa16.35■□□□□ 0.21
NID1-202ENST00000366595 FLRT2O43155 660 aa16.35■□□□□ 0.21
NID1-202ENST00000366595 HTR1AP08908 422 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms