RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 SLC22A12Q96S37 553 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 RANBP9Q96S59 729 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 SPIN2AQ99865 258 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 SPIN2BQ9BPZ2 258 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 URM1Q9BTM9 101 aaKnown RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 KIFC3Q9BVG8 833 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 MIS12Q9H081 205 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 UBQLN3Q9H347 655 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 SLC28A3Q9HAS3 691 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 DDX21Q9NR30 783 aaKnown RBP eCLIP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 KLRF1Q9NZS2 232 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 SENP1Q9P0U3 644 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 DHRS4-AS1Q9P1J3 65 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 ABI3Q9P2A4 366 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 CACNG4Q9UBN1 327 aa-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 HELZ2Q9BYK8 2649 aaKnown RBP-0.19□□□□□ -2.44
RNU6-54P-201ENST00000365563 IGLV4-69A0A075B6H9 119 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 ZSCAN5BA6NJL1 495 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 USP17L23D6RBM5 183 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 PRSS46E5RG02 174 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 NPIPB9F8W1W9 429 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 SLC1A7O00341 560 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 PQBP1O60828 265 aaKnown RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 TSC22D2O75157 780 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 WDHD1O75717 1129 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 PRAMEF12O95522 483 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 GALTP07902 379 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 EEF2P13639 858 aaKnown RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 CDH3P22223 829 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 CCNE1P24864 410 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 SPRP35270 261 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 LONP1P36776 959 aaKnown RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 PRCPP42785 496 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 SLC1A4P43007 532 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 MAGEB1P43366 347 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 KIR3DL2P43630 455 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 SLC15A1P46059 708 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 HSPA7P48741 367 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 NDST1P52848 882 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 HMGCS2P54868 508 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 MYL7Q01449 175 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 CDC16Q13042 620 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 PRKAA1Q13131 559 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 ORC2Q13416 577 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 SNTB1Q13884 538 aaKnown RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 CRMP1Q14194 572 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 MVPQ14764 893 aaKnown RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 DRAP1Q14919 205 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 IL17AQ16552 155 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 SOWAHCQ53LP3 525 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 ZNF805Q5CZA5 627 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 GCNT6Q5T4J0 391 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 RNF187Q5TA31 235 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 RRM2BQ7LG56 351 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 GALNT5Q7Z7M9 940 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 RPAINQ86UA6 219 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 TGIF2LYQ8IUE0 185 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 ERI1Q8IV48 349 aaKnown RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 CNTROBQ8N137 903 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 SLC37A3Q8NCC5 494 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 BEST4Q8NFU0 473 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 TNIP2Q8NFZ5 429 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 ZNF596Q8TC21 504 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 MORC4Q8TE76 937 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 PSPC1Q8WXF1 523 aaKnown RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 RUNDC3BQ96NL0 473 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 MCCC1Q96RQ3 725 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 OSBPL11Q9BXB4 747 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 OR2B2Q9GZK3 357 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 PABPC3Q9H361 631 aaKnown RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 CUEDC2Q9H467 287 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 NXF3Q9H4D5 531 aaKnown RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 G6PC2Q9NQR9 355 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 ARMCX1Q9P291 453 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 KLHL21Q9UJP4 597 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 ITGA11Q9UKX5 1188 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 CHTOPQ9Y3Y2 248 aaKnown RBP-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 IL16Q14005 1332 aa-0.2□□□□□ -2.44
RNU6-54P-201ENST00000365563 SORL1Q92673 2214 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 TRBV6-6A0A0A6YYG2 114 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 TLDC2A0PJX2 215 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 BCLAF3A2AJT9 711 aaKnown RBP-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 H0Y3Z8 333 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 PLA2G6O60733 806 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 ERAL1O75616 437 aaKnown RBP-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 RETP07949 1114 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 DANCRP0C864 163 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 VEGFAP15692 232 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 ZNF182P17025 639 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 PSMB1P20618 241 aaKnown RBP-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 FUT3P21217 361 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 COL8A2P25067 703 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 CDAP32320 146 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 GPD2P43304 727 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 OR3A2P47893 321 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 PRIM2P49643 509 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 RIPPLY3P57055 190 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 EFNB1P98172 346 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 PRB3Q04118 309 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 TMEM132DQ14C87 1099 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms