RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 HHIPQ96QV1 700 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 OR4K3Q96R72 315 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 SLC29A1Q99808 456 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 PAIP1Q9H074 479 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 PIF1Q9H611 641 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 ITM2CQ9NQX7 267 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 GEMIN8Q9NWZ8 242 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 UBAP1Q9NZ09 502 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 GULP1Q9UBP9 304 aa17.73■□□□□ 0.43
PDLIM7-203ENST00000359895 MGAT4DA6NG13 374 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 SCELO95171 688 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 APODP05090 189 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 GRIA2P42262 883 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 C21orf58P58505 322 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 SRSF11Q05519 484 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 UNC5DQ6UXZ4 953 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 ADAMTSL4Q6UY14 1074 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 SYT12Q8IV01 421 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 SFTPA1Q8IWL2 248 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 CHERPQ8IWX8 916 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 MSRB3Q8IXL7 192 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 ZNF548Q8NEK5 533 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 OR9A1PQ8NGU1 263 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 FAM110BQ8TC76 370 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 CENPKQ9BS16 269 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 IGFLR1Q9H665 355 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 SGK2Q9HBY8 427 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 SLC25A37Q9NYZ2 338 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 USP22Q9UPT9 525 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 DYRK1BQ9Y463 629 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 CKAP5Q14008 2032 aa17.72■□□□□ 0.43
PDLIM7-203ENST00000359895 ELOVL7A1L3X0 281 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 SAC3D1A6NKF1 404 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 FAM220BPB1ANY3 271 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 POP7O75817 140 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 LDLRP01130 860 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 HOXB6P17509 224 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 CKMT2P17540 419 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 TACR1P25103 407 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 TRPC1P48995 793 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 ACSM2AQ08AH3 577 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 CNTN1Q12860 1018 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 MTAPQ13126 283 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 PGS1Q32NB8 556 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 FAM98BQ52LJ0 330 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 ACSM2BQ68CK6 577 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 FKBP9P1Q75LS8 142 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 TRMT11Q7Z4G4 463 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 SPRED1Q7Z699 444 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 OR10A6Q8NH74 314 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 ZNF480Q8WV37 535 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 NELL1Q92832 810 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 WDR34Q96EX3 536 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 CPPED1Q9BRF8 314 aaPredicted RBP17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 UGT2B28Q9BY64 529 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 ZNF696Q9H7X3 374 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 SERHLQ9NQF3 203 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 PPT2Q9UMR5 302 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 INVSQ9Y283 1065 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 PCM1Q15154 2024 aa17.71■□□□□ 0.43
PDLIM7-203ENST00000359895 SOCS2O14508 198 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 TPST1O60507 370 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 RAP2AP10114 183 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 ZNF8P17098 575 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 PBX2P40425 430 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 KIR3DL1P43629 444 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 ASMTP46597 345 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 PHC1P78364 1004 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 RPA4Q13156 261 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 PIP5KL1Q5T9C9 394 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 EGFLAMQ63HQ2 1017 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 MED27Q6P2C8 311 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 SLCO4C1Q6ZQN7 724 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 SYTL1Q8IYJ3 562 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 MICU2Q8IYU8 434 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 FOXJ1Q92949 421 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 COX14Q96I36 57 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 BDH2Q9BUT1 245 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 EFCAB11Q9BUY7 163 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 SGPP1Q9BX95 441 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 NKX2-4Q9H2Z4 354 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 PRO3102Q9H379 93 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 PCDHB14Q9Y5E9 798 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 TRIOBPQ9H2D6 2365 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 RASAL1O95294 804 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 HOXB9P17482 250 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 TBPL1P62380 186 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 CHRNB3Q05901 458 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 SPIN4Q56A73 249 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 PAGE2BQ5JRK9 111 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 RNF220Q5VTB9 566 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 PPP2R2DQ66LE6 453 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 NAIF1Q69YI7 327 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 ANKRD54Q6NXT1 300 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 DNAJC14Q6Y2X3 702 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 CALHM3Q86XJ0 350 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 ZNF547Q8IVP9 402 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 CBR4Q8N4T8 237 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 ELSPBP1Q96BH3 223 aa17.7■□□□□ 0.42
PDLIM7-203ENST00000359895 FAM120BQ96EK7 910 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms