RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 GPR150Q8NGU9 434 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 RAB2BQ8WUD1 216 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 TIFAQ96CG3 184 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 ZIC5Q96T25 663 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 PRRG3Q9BZD7 231 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 POLE4Q9NR33 117 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 SLCO3A1Q9UIG8 710 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 RUVBL1Q9Y265 456 aaKnown RBP11.94□□□□□ -0.5
COL20A1-201ENST00000358894 XPNPEP2O43895 674 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 OR10H3O60404 316 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 PREPP48147 710 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 CLCN4P51793 760 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 LMAN2Q12907 356 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 RAB39AQ14964 217 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 ARSIQ5FYB1 569 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 SLAIN1Q8ND83 568 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 VANGL1Q8TAA9 524 aaPredicted RBP11.94□□□□□ -0.5
COL20A1-201ENST00000358894 S100ZQ8WXG8 99 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 ZNF597Q96LX8 424 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 HERC2P3Q9BVR0 1158 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 PCDHGA3Q9Y5H0 932 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 GPR45Q9Y5Y3 372 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 OAS3Q9Y6K5 1087 aaKnown RBP11.94□□□□□ -0.5
COL20A1-201ENST00000358894 CROCCQ5TZA2 2017 aa11.94□□□□□ -0.5
COL20A1-201ENST00000358894 ADAMTS4O75173 837 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 IFI30P13284 250 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 PRPS1L1P21108 318 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 RXRGP48443 463 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 DGKEP52429 567 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 SRSF11Q05519 484 aaKnown RBP11.93□□□□□ -0.5
COL20A1-201ENST00000358894 SYT16Q17RD7 645 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 MANEALQ5VSG8 457 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 NCEH1Q6PIU2 408 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 DEF8Q6ZN54 512 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 P2RY8Q86VZ1 359 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 KRT78Q8N1N4 520 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 TMEM102Q8N9M5 508 aaPredicted RBP11.93□□□□□ -0.5
COL20A1-201ENST00000358894 MIR1-1HGQ9H1L0 117 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 PTBP2Q9UKA9 531 aaKnown RBP11.93□□□□□ -0.5
COL20A1-201ENST00000358894 ANGPT4Q9Y264 503 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 LOC100130705A0A1B0GUX0 176 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 TGFB1P01137 390 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 ASMTP46597 345 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 AKR1D1P51857 326 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 MANFP55145 182 aaKnown RBP11.93□□□□□ -0.5
COL20A1-201ENST00000358894 C1DQ13901 141 aaKnown RBP11.93□□□□□ -0.5
COL20A1-201ENST00000358894 RCAN2Q14206 197 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 DSC3Q14574 896 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 DPY19L3Q6ZPD9 716 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 HS3ST5Q8IZT8 346 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 AMER2Q8N7J2 671 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 ZNF557Q8N988 423 aaPredicted RBP11.93□□□□□ -0.5
COL20A1-201ENST00000358894 ENKURQ8TC29 256 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 CXorf40AQ8TE69 158 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 GAB3Q8WWW8 586 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 GTPBP3Q969Y2 492 aaKnown RBP11.93□□□□□ -0.5
COL20A1-201ENST00000358894 MAELQ96JY0 434 aaKnown RBP11.93□□□□□ -0.5
COL20A1-201ENST00000358894 TPK1Q9H3S4 243 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.93□□□□□ -0.5
COL20A1-201ENST00000358894 ARMC1Q9NVT9 282 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 MAP10Q9P2G4 905 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 CNOT11Q9UKZ1 510 aaKnown RBP11.93□□□□□ -0.5
COL20A1-201ENST00000358894 KLHL20Q9Y2M5 609 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 PCDHGA11Q9Y5H2 935 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 B4GAT1O43505 415 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 PDYNP01213 254 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 ATP1B2P14415 290 aaPredicted RBP11.93□□□□□ -0.5
COL20A1-201ENST00000358894 BPIP17213 487 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 ATF6P18850 670 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 PPIBP23284 216 aaKnown RBP11.93□□□□□ -0.5
COL20A1-201ENST00000358894 ZNF648Q5T619 568 aaPredicted RBP11.93□□□□□ -0.5
COL20A1-201ENST00000358894 ZDHHC20Q5W0Z9 365 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 MED27Q6P2C8 311 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 C22orf39Q6P5X5 142 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 OR5AK3PQ8NH89 298 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 NACC2Q96BF6 587 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 TMEM106CQ9BVX2 250 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 ANKRD60Q9BZ19 345 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 CCNB1IP1Q9NPC3 277 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 IL26Q9NPH9 171 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 VAPAQ9P0L0 249 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 CORO2BQ9UQ03 480 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 AXIN1O15169 862 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 ATP13A5Q4VNC0 1218 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 FOXB2Q5VYV0 432 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 OR2T5Q6IEZ7 315 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 GDPD4Q6W3E5 623 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 TMEM173Q86WV6 379 aaPredicted RBP11.93□□□□□ -0.5
COL20A1-201ENST00000358894 PELI3Q8N2H9 469 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 OR2T29Q8NH02 315 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 STON2Q8WXE9 905 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 MYDGFQ969H8 173 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 CRISPLD1Q9H336 500 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 PCDHB3Q9Y5E6 796 aa11.93□□□□□ -0.5
COL20A1-201ENST00000358894 H0YC42 278 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 PLOD2O00469 737 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 SLC9A3R1O14745 358 aaPredicted RBP11.92□□□□□ -0.5
COL20A1-201ENST00000358894 SOD2P04179 222 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 ZNF26P17031 533 aaPredicted RBP11.92□□□□□ -0.5
COL20A1-201ENST00000358894 WASP42768 502 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms