RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 KIAA0907Q7Z7F0 614 aaPredicted RBP13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 DTWD1Q8N5C7 304 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 ZNF420Q8TAQ5 688 aaPredicted RBP13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 CSGALNACT1Q8TDX6 532 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 VPS50Q96JG6 964 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 CNDP2Q96KP4 475 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 RNF145Q96MT1 663 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 C1orf109Q9NX04 203 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 PIAS3Q9Y6X2 628 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 ATG2BQ96BY7 2078 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 TSPAN11A1L157 253 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 PABPN1LA6NDY0 278 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 KPNA5O15131 536 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 PDYNP01213 254 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 ALBP02768 609 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 HIST1H2AGP0C0S8 130 aaPredicted RBP13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 HIST1H2ADP20671 130 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 PCSK6P29122 969 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 SLC6A12P48065 614 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 ALDH3A2P51648 485 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 CDH15P55291 814 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 DCDC1P59894 354 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 EPS8Q12929 822 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 RUNX3Q13761 415 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 BOP1Q14137 746 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 PDGFRLQ15198 375 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 PLA2G4EQ3MJ16 856 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 GGTA1PQ4G0N0 100 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 USP39Q53GS9 565 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 CCNYL2Q5T2Q4 361 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 TMEM215Q68D42 235 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 VRK3Q8IV63 474 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 MAGEE2Q8TD90 523 aaPredicted RBP13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 SKA2Q8WVK7 121 aaPredicted RBP13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 ASB11Q8WXH4 323 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 TMIGD2Q96BF3 282 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 MTFMTQ96DP5 389 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 CHFRQ96EP1 664 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 HIST1H2AHQ96KK5 128 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 MRGPRX3Q96LB0 322 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 ZNF583Q96ND8 569 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 SEPHS2Q99611 448 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 HIST1H2AJQ99878 128 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 TUBA1CQ9BQE3 449 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 H2AFJQ9BTM1 129 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 OSBPL6Q9BZF3 934 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 FAM83DQ9H4H8 585 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 TBC1D17Q9HA65 648 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 DDX18Q9NVP1 670 aaKnown RBP13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 ZNHIT2Q9UHR6 403 aa13.88□□□□□ -0.19
NIPAL3-203ENST00000358028 VPS13AQ96RL7 3174 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 USP34Q70CQ2 3546 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 KCNE1BA0A087WTH5 132 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 TTC34A8MYJ7 566 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 CFAP99D6REC4 459 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 DFNA5O60443 496 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 SCELO95171 688 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 CYP2A7P20853 494 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 HNMTP50135 292 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 PLIN5Q00G26 463 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 DCTN2Q13561 401 aaKnown RBP13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 DAG1Q14118 895 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 CPSF6Q16630 551 aaKnown RBP eCLIP13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 ZXDCQ2QGD7 858 aaPredicted RBP13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 ITPRIPL2Q3MIP1 535 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 FAM174BQ3ZCQ3 159 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 SUSD1Q6UWL2 747 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 SERPINA13PQ6UXR4 307 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 NEK10Q6ZWH5 1172 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 FLCNQ8NFG4 579 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 OR2T12Q8NG77 320 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 FRS2Q8WU20 508 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 CYB5D2Q8WUJ1 264 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 GTF2H4Q92759 462 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 ACPTQ9BZG2 426 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 FOXQ1Q9C009 403 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 CLMPQ9H6B4 373 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 RAD18Q9NS91 495 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 MARK1Q9P0L2 795 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 CIDEBQ9UHD4 219 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 SNX6Q9UNH7 406 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 PCDHGA11Q9Y5H2 935 aa13.87□□□□□ -0.19
NIPAL3-203ENST00000358028 UPK3BL1B0FP48 263 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 UPK3BL2E5RIL1 263 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 GFYI3L273 518 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 GSTA4O15217 222 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 MTX2O75431 263 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 LEFTY1O75610 366 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 AP2A2O94973 939 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 CDK4P11802 303 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 TIMP2P16035 220 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 CTHP32929 405 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 HLCSP50747 726 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 HNRNPFP52597 415 aaKnown RBP13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 ARSFP54793 590 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 STARD6P59095 220 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 HPCAP84074 193 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 NHLH1Q02575 133 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 CYP4F3Q08477 520 aa13.86□□□□□ -0.19
NIPAL3-203ENST00000358028 MAPKAPK3Q16644 382 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms