RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 TNRC6BQ9UPQ9 1833 aaKnown RBP16.48■□□□□ 0.23
TPM1-205ENST00000357980 DNAJC8O75937 253 aaPredicted RBP16.47■□□□□ 0.23
TPM1-205ENST00000357980 VARSP26640 1264 aaKnown RBP16.47■□□□□ 0.23
TPM1-205ENST00000357980 SLC19A1P41440 591 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 ZNF33BQ06732 778 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 NR6A1Q15406 480 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 CATSPEREQ5SY80 951 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 THEMIS2Q5TEJ8 643 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 IYDQ6PHW0 289 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 WDR5BQ86VZ2 330 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 POU5F2Q8N7G0 328 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 OR2L8Q8NGY9 312 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 WDR20Q8TBZ3 569 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 SELENOMQ8WWX9 145 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 CMTM5Q96DZ9 223 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 LRRC61Q9BV99 259 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 PCBD2Q9H0N5 130 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 XKR8Q9H6D3 395 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 APOBEC3BQ9UH17 382 aaKnown RBP16.47■□□□□ 0.23
TPM1-205ENST00000357980 ZDBF2Q9HCK1 2354 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 HEATR5BQ9P2D3 2071 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 RGS14O43566 566 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 CSF2P04141 144 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 C1GALT1C1LP0DN25 315 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 NME1P15531 152 aaKnown RBP16.47■□□□□ 0.23
TPM1-205ENST00000357980 JUNDP17535 347 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 MRPL19P49406 292 aaKnown RBP16.47■□□□□ 0.23
TPM1-205ENST00000357980 RASSF2P50749 326 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 NEK2P51955 445 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 DIO3P55073 304 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 IRX1P78414 480 aaPredicted RBP16.47■□□□□ 0.23
TPM1-205ENST00000357980 HMGCS1Q01581 520 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 NXPE4Q6UWF7 544 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 LPCAT2Q7L5N7 544 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 MAML2Q8IZL2 1156 aaPredicted RBP16.47■□□□□ 0.23
TPM1-205ENST00000357980 MTFMTQ96DP5 389 aaKnown RBP16.47■□□□□ 0.23
TPM1-205ENST00000357980 PPP3R2Q96LZ3 170 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 SDR39U1Q9NRG7 319 aaPredicted RBP16.47■□□□□ 0.23
TPM1-205ENST00000357980 AIG1Q9NVV5 245 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 GEMIN8Q9NWZ8 242 aaKnown RBP16.47■□□□□ 0.23
TPM1-205ENST00000357980 TAC3Q9UHF0 121 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 GPR45Q9Y5Y3 372 aa16.47■□□□□ 0.23
TPM1-205ENST00000357980 LAMA1P25391 3075 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 SNRNP200O75643 2136 aaKnown RBP16.46■□□□□ 0.23
TPM1-205ENST00000357980 NPIPB8E9PQR5 432 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 COX4I1P13073 169 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 CTSEP14091 401 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 IDO1P14902 403 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 GPX3P22352 226 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 PSMB5P28074 263 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 CPA2P48052 419 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 NXPH1P58417 271 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 YBX1P67809 324 aaKnown RBP16.46■□□□□ 0.23
TPM1-205ENST00000357980 HERC3Q15034 1050 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 GSTA3Q16772 222 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 AP5B1Q2VPB7 878 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 PRRT3Q5FWE3 981 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 FNDC5Q8NAU1 212 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 KLHL29Q96CT2 875 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 CXorf40BQ96DE9 158 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 EFCAB11Q9BUY7 163 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 ACAT2Q9BWD1 397 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 BRINP2Q9C0B6 783 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 PCDHGA11Q9Y5H2 935 aa16.46■□□□□ 0.23
TPM1-205ENST00000357980 A0A0C4DFX4 3053 aa16.46■□□□□ 0.22
TPM1-205ENST00000357980 PSMD12O00232 456 aaPredicted RBP16.45■□□□□ 0.22
TPM1-205ENST00000357980 KDM1AO60341 852 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 CDH1P12830 882 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 PRPH2P23942 346 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 PTPN4P29074 926 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 ACADVLP49748 655 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 EMX2Q04743 252 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 SMU1Q2TAY7 513 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 RFTN2Q52LD8 501 aaPredicted RBP16.45■□□□□ 0.22
TPM1-205ENST00000357980 TJAP1Q5JTD0 557 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 RINLQ6ZS11 566 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 ARMCX6Q7L4S7 300 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 TAF8Q7Z7C8 310 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 C17orf64Q86WR6 236 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 FAM129CQ86XR2 697 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 LAS2Q8IYD9 372 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 KIF2BQ8N4N8 673 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 OR7G3Q8NG95 312 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 FBXO27Q8NI29 283 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 C1orf50Q9BV19 199 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 SLC40A1Q9NP59 571 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 PIPSLA2A3N6 862 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 TMEM221A6NGB7 291 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 M0R296 226 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 VILLO15195 856 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 LAMTOR5O43504 91 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 PRICKLE3O43900 615 aaPredicted RBP16.45■□□□□ 0.22
TPM1-205ENST00000357980 XRCC1P18887 633 aaPredicted RBP16.45■□□□□ 0.22
TPM1-205ENST00000357980 STX1BP61266 288 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 CSTF3Q12996 717 aaKnown RBP16.45■□□□□ 0.22
TPM1-205ENST00000357980 SLBPQ14493 270 aaKnown RBP eCLIP16.45■□□□□ 0.22
TPM1-205ENST00000357980 IMPG1Q17R60 797 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 KIF19Q2TAC6 998 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 WDR45BQ5MNZ6 344 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 ADNP2Q6IQ32 1131 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms