RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 GFM2Q969S9 779 aaKnown RBP21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 TOR3AQ9H497 397 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 FAM118AQ9NWS6 357 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 IL36AQ9UHA7 158 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 SAMD4AQ9UPU9 718 aaKnown RBP21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 GSNP06396 782 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 C21orf58P58505 322 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 ZNF77Q15935 545 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 SYTL3Q4VX76 610 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 XKR6Q5GH73 641 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 ZNF773Q6PK81 442 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 KCTD8Q6ZWB6 473 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 DPPA4Q7L190 304 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 ANKRD46Q86W74 232 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 HIPK1Q86Z02 1210 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 SYT12Q8IV01 421 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 MRPL43Q8N983 215 aaKnown RBP21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 GLMNQ92990 594 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 MRGPRX3Q96LB0 322 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 POLR1BQ9H9Y6 1135 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 THG1LQ9NWX6 298 aaKnown RBP21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 C3orf18Q9UK00 162 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 MAPRE3Q9UPY8 281 aa21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 RUVBL1Q9Y265 456 aaKnown RBP21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 MAGED1Q9Y5V3 778 aaPredicted RBP21.6■■□□□ 1.05
NKX2-1-201ENST00000354822 TTC34A8MYJ7 566 aa21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 CLGNO14967 610 aa21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 ATG13O75143 517 aa21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 CATP04040 527 aaKnown RBP21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 RHOP08100 348 aa21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 ERVFC1P60507 584 aa21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 PMS2P3Q13401 168 aa21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 BIRC2Q13490 618 aa21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 RFX4Q33E94 735 aa21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 OR4F3Q6IEY1 312 aa21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 DOK6Q6PKX4 331 aa21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 TECPR1Q7Z6L1 1165 aa21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 PGBD3Q8N328 593 aa21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 WDR20Q8TBZ3 569 aa21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 EGLN2Q96KS0 407 aa21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 MTCL1Q9Y4B5 1905 aaKnown RBP21.59■■□□□ 1.05
NKX2-1-201ENST00000354822 OR2AG2A6NM03 316 aa21.58■■□□□ 1.05
NKX2-1-201ENST00000354822 H0YIV9 168 aa21.58■■□□□ 1.05
NKX2-1-201ENST00000354822 MYO1DO94832 1006 aa21.58■■□□□ 1.05
NKX2-1-201ENST00000354822 LRATO95237 230 aa21.58■■□□□ 1.05
NKX2-1-201ENST00000354822 CDKN2CP42773 168 aa21.58■■□□□ 1.05
NKX2-1-201ENST00000354822 VAC14Q08AM6 782 aa21.58■■□□□ 1.05
NKX2-1-201ENST00000354822 PPIGQ13427 754 aaKnown RBP eCLIP21.58■■□□□ 1.05
NKX2-1-201ENST00000354822 SLC44A4Q53GD3 710 aa21.58■■□□□ 1.05
NKX2-1-201ENST00000354822 OR8J2Q8NGG1 315 aa21.58■■□□□ 1.05
NKX2-1-201ENST00000354822 TBC1D20Q96BZ9 403 aa21.58■■□□□ 1.05
NKX2-1-201ENST00000354822 BRF2Q9HAW0 419 aa21.58■■□□□ 1.05
NKX2-1-201ENST00000354822 SPATA6Q9NWH7 488 aaPredicted RBP21.58■■□□□ 1.05
NKX2-1-201ENST00000354822 FAM120CQ9NX05 1096 aaKnown RBP21.58■■□□□ 1.05
NKX2-1-201ENST00000354822 GPRC5BQ9NZH0 403 aa21.58■■□□□ 1.05
NKX2-1-201ENST00000354822 ARHGEF33A8MVX0 844 aa21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 FADS2P1A8MWK0 482 aa21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 SLC9A3R1O14745 358 aaPredicted RBP21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 DCKP27707 260 aa21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 RAB39AQ14964 217 aa21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 GRHL2Q6ISB3 625 aa21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 ERICH5Q6P6B1 374 aa21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 AGTRAPQ6RW13 159 aa21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 NRSN1Q8IZ57 195 aa21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 CYB5D2Q8WUJ1 264 aa21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 HDAC2Q92769 488 aaKnown RBP21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 GLYATL1Q969I3 302 aa21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 FOPNLQ96NB1 174 aa21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 DOK1Q99704 481 aa21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 CCM2Q9BSQ5 444 aa21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 SMURF2Q9HAU4 748 aa21.58■■□□□ 1.04
NKX2-1-201ENST00000354822 E2F6O75461 281 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 SRPRAP08240 638 aaKnown RBP21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 CDK4P11802 303 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 MYCLP1P12525 358 aaPredicted RBP21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 JUNBP17275 347 aaPredicted RBP21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 SYN1P17600 705 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 DCTP40126 519 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 BROXQ5VW32 411 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 ERAP2Q6P179 960 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 SPESP1Q6UW49 350 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 C12orf43Q96C57 262 aaKnown RBP21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 PANX1Q96RD7 426 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 REXO4Q9GZR2 422 aaKnown RBP21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 AASDHPPTQ9NRN7 309 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 ORC6Q9Y5N6 252 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 HIDE1A8MVS5 230 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 FPGTO14772 594 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 RFPL2O75678 378 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 CPNE6O95741 557 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 EEF1B2P24534 225 aaKnown RBP21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 MAGEA2P43356 314 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 PRLHRP49683 370 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 IST1P53990 364 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 DOC2AQ14183 400 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 ZC3H12BQ5HYM0 836 aaKnown RBP21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 PLPP4Q5VZY2 271 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 DHRS4L2Q6PKH6 230 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 NAT16Q8N8M0 369 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 TMEM9Q9P0T7 183 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms