RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 CARFQ8N187 725 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 TCAIMQ8N3R3 496 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 AGBL5Q8NDL9 886 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 RUFY1Q96T51 708 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 CMKLR1Q99788 373 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 FAM60AQ9NP50 221 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 SLC6A20Q9NP91 592 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 MRPS30Q9NP92 439 aaKnown RBP21.33■■□□□ 1
SHMT1-203ENST00000354098 CUEDC1Q9NWM3 386 aaPredicted RBP21.33■■□□□ 1
SHMT1-203ENST00000354098 SOHLH2Q9NX45 425 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 SATB2Q9UPW6 733 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 WDFY3Q8IZQ1 3526 aa21.33■■□□□ 1
SHMT1-203ENST00000354098 CCDC187A0A096LP49 1063 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 MYZAPP0CAP1 466 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 ITIH1P19827 911 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 CCND1P24385 295 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 CMPK1P30085 196 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 HSD11B2P80365 405 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 CAMK2BQ13554 666 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 C3orf38Q5JPI3 329 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 FCRL6Q6DN72 434 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 FOXR1Q6PIV2 292 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 LCTLQ6UWM7 567 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 EXOC3L1Q86VI1 746 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 FAM129CQ86XR2 697 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 FBXO39Q8N4B4 442 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 C19orf47Q8N9M1 422 aaKnown RBP21.32■■□□□ 1
SHMT1-203ENST00000354098 DPH7Q9BTV6 452 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 GRID1Q9ULK0 1009 aa21.32■■□□□ 1
SHMT1-203ENST00000354098 LRRC14BA6NHZ5 514 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 EFCAB7A8K855 629 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 WDR47O94967 919 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 EBLN1P0CF75 366 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 FGF3P11487 239 aaPredicted RBP21.31■■□□□ 1
SHMT1-203ENST00000354098 FOLR1P15328 257 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 ARL4DP49703 201 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 FIGLAQ6QHK4 219 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 KMT5CQ86Y97 462 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 D2HGDHQ8N465 521 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 PHF21BQ96EK2 531 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 APOPT1Q96IL0 206 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 SMC6Q96SB8 1091 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 CD244Q9BZW8 370 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 PCBD2Q9H0N5 130 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 SNRNP200O75643 2136 aaKnown RBP21.31■■□□□ 1
SHMT1-203ENST00000354098 KIF26BQ2KJY2 2108 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 MED19A0JLT2 244 aaPredicted RBP21.31■■□□□ 1
SHMT1-203ENST00000354098 STK16O75716 305 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 ALDH18A1P54886 795 aaKnown RBP21.31■■□□□ 1
SHMT1-203ENST00000354098 SETDB1Q15047 1291 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 KLHDC8AQ8IYD2 350 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 PTGR2Q8N8N7 351 aaPredicted RBP21.31■■□□□ 1
SHMT1-203ENST00000354098 BMPERQ8N8U9 685 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 WDR36Q8NI36 951 aaKnown RBP21.31■■□□□ 1
SHMT1-203ENST00000354098 CNOT10Q9H9A5 744 aaKnown RBP21.31■■□□□ 1
SHMT1-203ENST00000354098 TMBIM4Q9HC24 238 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 MKS1Q9NXB0 559 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 BTRCQ9Y297 605 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 CACNA1AO00555 2505 aa21.31■■□□□ 1
SHMT1-203ENST00000354098 KNTC1P50748 2209 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 H7BY64 318 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 PLD2O14939 933 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 HCRTR1O43613 425 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 CCNT2O60583 730 aaKnown RBP21.3■■□□□ 1
SHMT1-203ENST00000354098 SASH3O75995 380 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 FKBP9O95302 570 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 SIX3O95343 332 aaPredicted RBP21.3■■□□□ 1
SHMT1-203ENST00000354098 PROCP04070 461 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 ETV5P41161 510 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 ABATP80404 500 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 UBTD2Q8WUN7 234 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 NEIL2Q969S2 332 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 ZUFSPQ96AP4 578 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 TCTN2Q96GX1 697 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 PRR11Q96HE9 360 aaPredicted RBP21.3■■□□□ 1
SHMT1-203ENST00000354098 PRAP1Q96NZ9 151 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 PDE7BQ9NP56 450 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 ZNF446Q9NWS9 450 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 SIDT1Q9NXL6 827 aaKnown RBP21.3■■□□□ 1
SHMT1-203ENST00000354098 AKAP7Q9P0M2 348 aaPredicted RBP21.3■■□□□ 1
SHMT1-203ENST00000354098 SENP1Q9P0U3 644 aa21.3■■□□□ 1
SHMT1-203ENST00000354098 PCM1Q15154 2024 aa21.29■■□□□ 1
SHMT1-203ENST00000354098 A8MT66 165 aa21.29■■□□□ 1
SHMT1-203ENST00000354098 DLX3O60479 287 aa21.29■■□□□ 1
SHMT1-203ENST00000354098 PLIN3O60664 434 aa21.29■■□□□ 1
SHMT1-203ENST00000354098 SMIM24O75264 130 aa21.29■■□□□ 1
SHMT1-203ENST00000354098 IPO13O94829 963 aaKnown RBP21.29■■□□□ 1
SHMT1-203ENST00000354098 CCNDBP1O95273 360 aa21.29■■□□□ 1
SHMT1-203ENST00000354098 MLLT3P42568 568 aaPredicted RBP21.29■■□□□ 1
SHMT1-203ENST00000354098 EIF3IQ13347 325 aaKnown RBP21.29■■□□□ 1
SHMT1-203ENST00000354098 C17orf64Q86WR6 236 aa21.29■■□□□ 1
SHMT1-203ENST00000354098 HAUS8Q9BT25 410 aa21.29■■□□□ 1
SHMT1-203ENST00000354098 VIPAS39Q9H9C1 493 aa21.29■■□□□ 1
SHMT1-203ENST00000354098 PISDQ9UG56 409 aa21.29■■□□□ 1
SHMT1-203ENST00000354098 PLLPQ9Y342 182 aa21.29■■□□□ 1
SHMT1-203ENST00000354098 KLK4Q9Y5K2 254 aa21.29■■□□□ 1
SHMT1-203ENST00000354098 CTSVO60911 334 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 JMJD7P0C870 316 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 CDH1P12830 882 aa21.28■■□□□ 1
SHMT1-203ENST00000354098 FOXM1Q08050 763 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms