RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CLDN2P57739 230 aa13.33□□□□□ -0.27
SMC6-201ENST00000351948 CSNK2BP67870 215 aa13.33□□□□□ -0.27
SMC6-201ENST00000351948 FOLH1Q04609 750 aa13.33□□□□□ -0.27
SMC6-201ENST00000351948 SPANXN4Q5MJ08 99 aa13.33□□□□□ -0.27
SMC6-201ENST00000351948 FAM47BQ8NA70 645 aa13.33□□□□□ -0.27
SMC6-201ENST00000351948 RAB7BQ96AH8 199 aa13.33□□□□□ -0.27
SMC6-201ENST00000351948 TMEM74Q96NL1 305 aa13.33□□□□□ -0.27
SMC6-201ENST00000351948 GDE1Q9NZC3 331 aa13.33□□□□□ -0.27
SMC6-201ENST00000351948 MAFFQ9ULX9 164 aa13.33□□□□□ -0.27
SMC6-201ENST00000351948 KRT33AO76009 404 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 IL7RP16871 459 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 HSD17B2P37059 387 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 LARS2Q15031 903 aaKnown RBP13.33□□□□□ -0.28
SMC6-201ENST00000351948 WDR45BQ5MNZ6 344 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 TMEM240Q5SV17 173 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 KLHDC10Q6PID8 442 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 FRMD7Q6ZUT3 714 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 PIANPQ8IYJ0 282 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 TBC1D21Q8IYX1 336 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 OR4K1Q8NGD4 311 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 SLC2A4RGQ9NR83 387 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 POMPQ9Y244 141 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 CCDC189A1A4V9 331 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 CXCR6O00574 342 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 PGFP49763 221 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 TAF13Q15543 124 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 RFTN2Q52LD8 501 aaPredicted RBP13.33□□□□□ -0.28
SMC6-201ENST00000351948 XKR4Q5GH76 650 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 HTR3DQ70Z44 454 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 GTPBP3Q969Y2 492 aaKnown RBP13.33□□□□□ -0.28
SMC6-201ENST00000351948 NSMCE3Q96MG7 304 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 PCDHGB3Q9Y5G1 929 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 TMEM150CB9EJG8 249 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 MCIDASD6RGH6 385 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 IFNW1P05000 195 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 SMIM11AP58511 58 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 FAM189BP81408 668 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 MDGA1Q8NFP4 955 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 C5orf34Q96MH7 638 aa13.33□□□□□ -0.28
SMC6-201ENST00000351948 KPNA4O00629 521 aaPredicted RBP13.32□□□□□ -0.28
SMC6-201ENST00000351948 LAMTOR5O43504 91 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 VARSP26640 1264 aaKnown RBP13.32□□□□□ -0.28
SMC6-201ENST00000351948 DYNC1I2Q13409 638 aaKnown RBP13.32□□□□□ -0.28
SMC6-201ENST00000351948 TRIM25Q14258 630 aaKnown RBP13.32□□□□□ -0.28
SMC6-201ENST00000351948 ANGPT1Q15389 498 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 OR4D1Q15615 310 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 ANKRD33Q7Z3H0 272 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 GKN2Q86XP6 184 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 TICAM1Q8IUC6 712 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 RELL1Q8IUW5 271 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 CBR4Q8N4T8 237 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 TEX47Q8TBZ9 253 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 CMTM7Q96FZ5 175 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 ZBP1Q9H171 429 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 APOBEC3BQ9UH17 382 aaKnown RBP13.32□□□□□ -0.28
SMC6-201ENST00000351948 UTS2RQ9UKP6 389 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 PCDHB11Q9Y5F2 797 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 CLCA3PQ9Y6N3 262 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 OR6C74A6NCV1 312 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 PRPS1L1P21108 318 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 SOX6P35712 828 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 CTSKP43235 329 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 RAPSNQ13702 412 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 GANABQ14697 944 aaKnown RBP13.32□□□□□ -0.28
SMC6-201ENST00000351948 PTGR1Q14914 329 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 TECRLQ5HYJ1 363 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 GPR26Q8NDV2 337 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 OR52B6Q8NGF0 335 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 ANKRD49Q8WVL7 239 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 LINC01599Q8WXQ3 324 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 RNFT2Q96EX2 444 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 TBC1D23Q9NUY8 699 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 TNFRSF11BO00300 401 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 SEMA4FO95754 770 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 FABP3P05413 133 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 GALK1P51570 392 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 ARF5P84085 180 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 FAM98AQ8NCA5 519 aaKnown RBP13.32□□□□□ -0.28
SMC6-201ENST00000351948 SLC38A2Q96QD8 506 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 SLC35A5Q9BS91 424 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 TMEM30AQ9NV96 361 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 FAM25AB3EWG3 89 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 FAM25CB3EWG5 89 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 FAM25GB3EWG6 89 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 ITGAXP20702 1163 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 HOXD9P28356 352 aaPredicted RBP13.32□□□□□ -0.28
SMC6-201ENST00000351948 PLEKHS1Q5SXH7 462 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 ERICH5Q6P6B1 374 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 SCAIQ8N9R8 606 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 GLB1L3Q8NCI6 653 aaPredicted RBP13.32□□□□□ -0.28
SMC6-201ENST00000351948 SMPDL3BQ92485 455 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 CEP295NLQ96MC4 621 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 REXO4Q9GZR2 422 aaKnown RBP13.32□□□□□ -0.28
SMC6-201ENST00000351948 TRIM39Q9HCM9 518 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 DNAAF2Q9NVR5 837 aaKnown RBP13.32□□□□□ -0.28
SMC6-201ENST00000351948 COPS7AQ9UBW8 275 aa13.32□□□□□ -0.28
SMC6-201ENST00000351948 FEZF1A0PJY2 475 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 DRGXA6NNA5 263 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 CSNK2A2P19784 350 aaPredicted RBP13.31□□□□□ -0.28
SMC6-201ENST00000351948 C5AR1P21730 350 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms