RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 DNASE1L3Q13609 305 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 ZNF460Q14592 562 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 PRAMEF13Q5VWM6 474 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 FCRL6Q6DN72 434 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 AGTRAPQ6RW13 159 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 ADCK2Q7Z695 626 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 MCATQ8IVS2 390 aaKnown RBP18.43■□□□□ 0.54
SYNE4-202ENST00000340477 SLC45A3Q96JT2 553 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 C17orf62Q9BQA9 187 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 RHOXF2Q9BQY4 288 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 MCMBPQ9BTE3 642 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 DPH7Q9BTV6 452 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 NINJ2Q9NZG7 142 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 CTNNAL1Q9UBT7 734 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 NOVA2Q9UNW9 492 aaKnown RBP18.43■□□□□ 0.54
SYNE4-202ENST00000340477 KLK4Q9Y5K2 254 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 IKBKGQ9Y6K9 419 aa18.43■□□□□ 0.54
SYNE4-202ENST00000340477 C9J4A7 227 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 MEN1O00255 615 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 KATNA1O75449 491 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 HRH2P25021 359 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 GABRA4P48169 554 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 PGGT1BP53609 377 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 RPS15P62841 145 aaKnown RBP18.42■□□□□ 0.54
SYNE4-202ENST00000340477 PRDX1Q06830 199 aaKnown RBP18.42■□□□□ 0.54
SYNE4-202ENST00000340477 UAP1Q16222 522 aaPredicted RBP18.42■□□□□ 0.54
SYNE4-202ENST00000340477 PHKG1Q16816 387 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 CAPN13Q6MZZ7 669 aaPredicted RBP18.42■□□□□ 0.54
SYNE4-202ENST00000340477 RAPH1Q70E73 1250 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 TAOK1Q7L7X3 1001 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 SPNS2Q8IVW8 549 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 CEP97Q8IW35 865 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 DSELQ8IZU8 1212 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 ZNF655Q8N720 491 aaPredicted RBP18.42■□□□□ 0.54
SYNE4-202ENST00000340477 CT55Q8WUE5 264 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 STARD8Q92502 1023 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 ALKBH8Q96BT7 664 aaKnown RBP18.42■□□□□ 0.54
SYNE4-202ENST00000340477 UBL7Q96S82 380 aaPredicted RBP18.42■□□□□ 0.54
SYNE4-202ENST00000340477 FAM117AQ9C073 453 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 CDC42EP4Q9H3Q1 356 aaKnown RBP18.42■□□□□ 0.54
SYNE4-202ENST00000340477 CAB39LQ9H9S4 337 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 SNX7Q9UNH6 387 aa18.42■□□□□ 0.54
SYNE4-202ENST00000340477 NPEPPSL1A6NEC2 478 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 SRPX2O60687 465 aaPredicted RBP18.41■□□□□ 0.54
SYNE4-202ENST00000340477 ACSL3O95573 720 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 GUCA1CO95843 209 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 ARSFP54793 590 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 RAB10P61026 200 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 GPS2Q13227 327 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 GRM7Q14831 915 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 EFTUD2Q15029 972 aaKnown RBP eCLIP18.41■□□□□ 0.541e-7■■■■■ 52.3
SYNE4-202ENST00000340477 PRAMEF17Q5VTA0 474 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 YOD1Q5VVQ6 348 aaPredicted RBP18.41■□□□□ 0.54
SYNE4-202ENST00000340477 MBOAT1Q6ZNC8 495 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 C17orf64Q86WR6 236 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 PROKR1Q8TCW9 393 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 MRRFQ96E11 262 aaKnown RBP18.41■□□□□ 0.54
SYNE4-202ENST00000340477 EGFL8Q99944 293 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 ZFYVE21Q9BQ24 234 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 GPR87Q9BY21 358 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 DERL2Q9GZP9 239 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 SPRTNQ9H040 489 aaPredicted RBP18.41■□□□□ 0.54
SYNE4-202ENST00000340477 ACSS3Q9H6R3 686 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 SLC6A20Q9NP91 592 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 NFU1Q9UMS0 254 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 SPTBP11277 2137 aa18.41■□□□□ 0.54
SYNE4-202ENST00000340477 A0A0J9YVX5 310 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 OR2A25A4D2G3 310 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 ERVH48-1M5A8F1 160 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 PHGDHO43175 533 aaKnown RBP18.4■□□□□ 0.54
SYNE4-202ENST00000340477 C1QAP02745 245 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 ANXA5P08758 320 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 EZRP15311 586 aaKnown RBP18.4■□□□□ 0.54
SYNE4-202ENST00000340477 CRABP2P29373 138 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 ATP6V0D1P61421 351 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 NAE1Q13564 534 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 TAF1BQ53T94 588 aaPredicted RBP18.4■□□□□ 0.54
SYNE4-202ENST00000340477 RHBDD2Q6NTF9 364 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 TMEM207Q6UWW9 146 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 RNF44Q7L0R7 432 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 TBC1D1Q86TI0 1168 aaPredicted RBP18.4■□□□□ 0.54
SYNE4-202ENST00000340477 RERGQ96A58 199 aaPredicted RBP18.4■□□□□ 0.54
SYNE4-202ENST00000340477 FBXL8Q96CD0 374 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 CATSPER2Q96P56 530 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 PLCD4Q9BRC7 762 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 HAUS8Q9BT25 410 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 ATG10Q9H0Y0 220 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 L2HGDHQ9H9P8 463 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 PCMTD2Q9NV79 361 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 IL17BQ9UHF5 180 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 GPN3Q9UHW5 284 aaPredicted RBP18.4■□□□□ 0.54
SYNE4-202ENST00000340477 CFAP47Q6ZTR5 3102 aa18.4■□□□□ 0.54
SYNE4-202ENST00000340477 CHD6Q8TD26 2715 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 HEATR5BQ9P2D3 2071 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 CTSVO60911 334 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 ITGB2P05107 769 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 INHBAP08476 426 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 CCDC166P0CW27 439 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 ECHS1P30084 290 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 RORAP35398 523 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms