RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ABATP80404 500 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 RELAQ04206 551 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 SP140Q13342 867 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 CUL1Q13616 776 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 IL10RAQ13651 578 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 LCN10Q6JVE6 187 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 TCTN3Q6NUS6 607 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 RAB43Q86YS6 212 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 FAM20CQ8IXL6 584 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 PALM2Q8IXS6 379 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 FKBP10Q96AY3 582 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 NACC2Q96BF6 587 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 ABHD17AQ96GS6 310 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 RUFY1Q96T51 708 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 KRT12Q99456 494 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 PKP4Q99569 1192 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 SLC30A3Q99726 388 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 MIPEPQ99797 713 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 PPANQ9NQ55 473 aaKnown RBP12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 IFT80Q9P2H3 777 aaPredicted RBP12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 NDOR1Q9UHB4 597 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 ANAPC2Q9UJX6 822 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 SNRNP200O75643 2136 aaKnown RBP12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 OR2A25A4D2G3 310 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 FAM187AA6NFU0 413 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 E7ESA3 106 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 SLC16A5O15375 505 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 BANF1O75531 89 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 SLC16A8O95907 504 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 ALBP02768 609 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 SPTBP11277 2137 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 CASQ1P31415 396 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 RRADP55042 308 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 ETF1P62495 437 aaKnown RBP12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 PRDX1Q06830 199 aaKnown RBP12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 SSPNQ14714 243 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 NKAIN1Q4KMZ8 207 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 TEDDM1Q5T9Z0 273 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 CYHR1Q6ZMK1 362 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 UBE2R2Q712K3 238 aaPredicted RBP12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 MED25Q71SY5 747 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 RNF44Q7L0R7 432 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 PRICKLE2Q7Z3G6 844 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 IGDCC3Q8IVU1 814 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 CPNE9Q8IYJ1 553 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 TMEM102Q8N9M5 508 aaPredicted RBP12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 MCOLN3Q8TDD5 553 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 CCDC138Q96M89 665 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 ZFYVE21Q9BQ24 234 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 TRIM51Q9BSJ1 452 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 PCBD2Q9H0N5 130 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 WDR54Q9H977 334 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 MRPS30Q9NP92 439 aaKnown RBP12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 ACSS2Q9NR19 701 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 NSMCE4AQ9NXX6 385 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 DHCR7Q9UBM7 475 aaKnown RBP12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 TSR3Q9UJK0 312 aaKnown RBP12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 G3BP2Q9UN86 482 aaKnown RBP12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 CHMP2BQ9UQN3 213 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 KLHL20Q9Y2M5 609 aa12.78□□□□□ -0.36
SIRPB3P-201ENST00000340424 E7ENX8 843 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 TXNDC9O14530 226 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 DSCR3O14972 297 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 FANCGO15287 622 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 KLF7O75840 302 aaPredicted RBP12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 AHSGP02765 367 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 EZRP15311 586 aaKnown RBP12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 CCND1P24385 295 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 HRH2P25021 359 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 MCM3P25205 808 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 PSMB5P28074 263 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 FOLR3P41439 243 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 CARSP49589 748 aaKnown RBP12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 TAP2Q03519 686 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 CALCOCO2Q13137 446 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 FASTKQ14296 549 aaKnown RBP12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 C1orf189Q5VU69 101 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 ICE2Q659A1 982 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 FAM45BPQ6NSW5 357 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 MRPL14Q6P1L8 145 aaKnown RBP12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 TTLL10Q6ZVT0 673 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 SLC26A11Q86WA9 606 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 MYO1HQ8N1T3 1032 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 SPATA4Q8NEY3 305 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 OR2Y1Q8NGV0 311 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 FAM45AQ8TCE6 357 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 ZNF480Q8WV37 535 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 CFAP36Q96G28 342 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 NDNQ99608 321 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 PLCD4Q9BRC7 762 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 ERP44Q9BS26 406 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 DPH7Q9BTV6 452 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 ING2Q9H160 280 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 CUTCQ9NTM9 273 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 WHRNQ9P202 907 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 ZFATQ9P243 1243 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 NXT1Q9UKK6 140 aaKnown RBP12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 PCDHGB7Q9Y5F8 929 aa12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 PCDHGA9Q9Y5G4 932 aaKnown RBP12.77□□□□□ -0.37
SIRPB3P-201ENST00000340424 SEC16AO15027 2179 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms