RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ZNF182P17025 639 aaPredicted RBP13.41□□□□□ -0.26
RTN4-202ENST00000337526 FUT4P22083 530 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 OR2B6P58173 313 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 MYBPC3Q14896 1274 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 MBOAT1Q6ZNC8 495 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 C14orf80Q86SX3 495 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 JAZF1Q86VZ6 243 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 ZDHHC14Q8IZN3 488 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 OR10H5Q8NGA6 315 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 TNFAIP8L1Q8WVP5 186 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 SLC45A3Q96JT2 553 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 PRICKLE1Q96MT3 831 aaPredicted RBP13.41□□□□□ -0.26
RTN4-202ENST00000337526 ZNF641Q96N77 438 aaPredicted RBP13.41□□□□□ -0.26
RTN4-202ENST00000337526 MUS81Q96NY9 551 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 CKLFQ9UBR5 152 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 MRTO4Q9UKD2 239 aaKnown RBP13.41□□□□□ -0.26
RTN4-202ENST00000337526 TMED5Q9Y3A6 229 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 DSTNP60981 165 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 CDK6Q00534 326 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 IRAK1BP1Q5VVH5 260 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 TPGS2Q68CL5 300 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 TXNDC8Q6A555 127 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 NLGN2Q8NFZ4 835 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 ZCCHC10Q8TBK6 192 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 GEMIN6Q8WXD5 167 aaKnown RBP13.41□□□□□ -0.26
RTN4-202ENST00000337526 TRNT1Q96Q11 434 aaKnown RBP13.41□□□□□ -0.26
RTN4-202ENST00000337526 RIOK2Q9BVS4 552 aaKnown RBP13.41□□□□□ -0.26
RTN4-202ENST00000337526 ITPAQ9BY32 194 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 DKK3Q9UBP4 350 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 PPIEQ9UNP9 301 aaKnown RBP13.41□□□□□ -0.26
RTN4-202ENST00000337526 RNF11Q9Y3C5 154 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 RWDD3Q9Y3V2 267 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 PRSS51A0A1B0GVH4 220 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 A0A1W2PRU2 124 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 TRBC2A0A5B9 178 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 PRAMEF11O60813 436 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 AGTR2P50052 363 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 ATP4BP51164 291 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 PGGT1BP53609 377 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 SPATS1Q496A3 300 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 TPRG1LQ5T0D9 272 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 GPR135Q8IZ08 494 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 SAMD14Q8IZD0 417 aaPredicted RBP13.41□□□□□ -0.26
RTN4-202ENST00000337526 SH3RF2Q8TEC5 729 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 LMLNQ96KR4 655 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 C12orf66Q96MD2 445 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 GMLQ99445 158 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 HTATIP2Q9BUP3 242 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 TMEM248Q9NWD8 314 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 THUMPD1Q9NXG2 353 aaKnown RBP13.41□□□□□ -0.26
RTN4-202ENST00000337526 PCDHGA10Q9Y5H3 936 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 C10orf71Q711Q0 1435 aa13.41□□□□□ -0.26
RTN4-202ENST00000337526 MYOCOSA0A1B0GUC4 107 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 CLDN4O14493 209 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 PABPC4LP0CB38 370 aaKnown RBP13.4□□□□□ -0.26
RTN4-202ENST00000337526 LAPTM4AQ15012 233 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 SPIN4Q56A73 249 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 GDPD4Q6W3E5 623 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 FAM129CQ86XR2 697 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 SLC30A8Q8IWU4 369 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 TMEM203Q969S6 136 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 CRELD1Q96HD1 420 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 CAMK1GQ96NX5 476 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 BCL2L14Q9BZR8 327 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 ADAP2Q9NPF8 381 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 YIPF1Q9Y548 306 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 LEPRP48357 1165 aaKnown RBP13.4□□□□□ -0.26
RTN4-202ENST00000337526 TUBA3CQ13748 450 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 TLR1Q15399 786 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 TMEM44Q2T9K0 475 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 FBXO43Q4G163 708 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 TECRLQ5HYJ1 363 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 GDF6Q6KF10 455 aaPredicted RBP13.4□□□□□ -0.26
RTN4-202ENST00000337526 KLHL6Q8WZ60 621 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 C5orf34Q96MH7 638 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 ZNF778Q96MU6 729 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 TTYH1Q9H313 450 aaPredicted RBP13.4□□□□□ -0.26
RTN4-202ENST00000337526 DAPL1A0PJW8 107 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 SCAMP1O15126 338 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 SLC31A1O15431 190 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 S100A9P06702 114 aaKnown RBP13.4□□□□□ -0.26
RTN4-202ENST00000337526 TFPIP10646 304 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 SLC6A4P31645 630 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 GMPRP36959 345 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 SLC15A1P46059 708 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 KHKP50053 298 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 AP3S2P59780 193 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 HSF2Q03933 536 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 ILF3Q12906 894 aaKnown RBP eCLIP13.4□□□□□ -0.26
RTN4-202ENST00000337526 NUDT13Q86X67 352 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 PJA1Q8NG27 643 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 LRCH3Q96II8 777 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 KCTD7Q96MP8 289 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 IFT27Q9BW83 186 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 DSN1Q9H410 356 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 PRAMEF33A0A0G2JMD5 474 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 FZD9O00144 591 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 PRAMEF10O60809 474 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 REM1O75628 298 aa13.4□□□□□ -0.26
RTN4-202ENST00000337526 SNAP29O95721 258 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms