RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 TRIM16O95361 564 aa13.08□□□□□ -0.32
SKA3-202ENST00000314759 CXCR2P25025 360 aa13.08□□□□□ -0.32
SKA3-202ENST00000314759 LIPAP38571 399 aa13.08□□□□□ -0.32
SKA3-202ENST00000314759 CREMQ03060 361 aa13.08□□□□□ -0.32
SKA3-202ENST00000314759 DSC1Q08554 894 aa13.08□□□□□ -0.32
SKA3-202ENST00000314759 CPSF6Q16630 551 aaKnown RBP eCLIP13.08□□□□□ -0.32
SKA3-202ENST00000314759 RSBN1Q5VWQ0 802 aaPredicted RBP13.08□□□□□ -0.32
SKA3-202ENST00000314759 KIAA1614Q5VZ46 1190 aa13.08□□□□□ -0.32
SKA3-202ENST00000314759 FAM151BQ6UXP7 276 aa13.08□□□□□ -0.32
SKA3-202ENST00000314759 SERPINA9Q86WD7 417 aa13.08□□□□□ -0.32
SKA3-202ENST00000314759 CCDC103Q8IW40 242 aa13.08□□□□□ -0.32
SKA3-202ENST00000314759 KIAA1958Q8N8K9 716 aa13.08□□□□□ -0.32
SKA3-202ENST00000314759 ELMO1Q92556 727 aa13.08□□□□□ -0.32
SKA3-202ENST00000314759 TSSK3Q96PN8 268 aa13.08□□□□□ -0.32
SKA3-202ENST00000314759 TRPV5Q9NQA5 729 aa13.08□□□□□ -0.32
SKA3-202ENST00000314759 AASDHPPTQ9NRN7 309 aa13.08□□□□□ -0.32
SKA3-202ENST00000314759 EFNA1P20827 205 aaPredicted RBP13.07□□□□□ -0.32
SKA3-202ENST00000314759 FPR1P21462 350 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 RGS4P49798 205 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 TWF1Q12792 350 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 PROX2Q3B8N5 592 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 PRSS36Q5K4E3 855 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 CCBE1Q6UXH8 406 aaPredicted RBP13.07□□□□□ -0.32
SKA3-202ENST00000314759 GDPD3Q7L5L3 318 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 SYTL1Q8IYJ3 562 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 NLGN4XQ8N0W4 816 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 ELMOD1Q8N336 334 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 METTL4Q8N3J2 472 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 APH1BQ8WW43 257 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 RNF38Q9H0F5 515 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 MOV10Q9HCE1 1003 aaKnown RBP13.07□□□□□ -0.32
SKA3-202ENST00000314759 SIRT5Q9NXA8 310 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 PCDHB9Q9Y5E1 797 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 ISPDA4D126 451 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 AGAP5A6NIR3 686 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 GOLGA8CPA6NN73 597 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 HOXC11O43248 304 aaPredicted RBP13.07□□□□□ -0.32
SKA3-202ENST00000314759 PGLSO95336 258 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 CD160O95971 181 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 PDYNP01213 254 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 RHOCP08134 193 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 EPB42P16452 691 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 ZNF7P17097 686 aaPredicted RBP13.07□□□□□ -0.32
SKA3-202ENST00000314759 CTPS1P17812 591 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 RACK1P63244 317 aaKnown RBP13.07□□□□□ -0.32
SKA3-202ENST00000314759 RPP38P78345 283 aaKnown RBP13.07□□□□□ -0.32
SKA3-202ENST00000314759 ZNF404Q494X3 552 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 SMUG1Q53HV7 270 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 ZCCHC8Q6NZY4 707 aaKnown RBP13.07□□□□□ -0.32
SKA3-202ENST00000314759 EGLN2Q96KS0 407 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 GPR63Q9BZJ6 419 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 KRT84Q9NSB2 600 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 WDR70Q9NW82 654 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 TBC1D14Q9P2M4 693 aa13.07□□□□□ -0.32
SKA3-202ENST00000314759 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.07□□□□□ -0.32
SKA3-202ENST00000314759 SAMHD1Q9Y3Z3 626 aaKnown RBP13.07□□□□□ -0.32
SKA3-202ENST00000314759 GAPDHSO14556 408 aaPredicted RBP13.06□□□□□ -0.32
SKA3-202ENST00000314759 RFXANKO14593 260 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 MRPS14O60783 128 aaKnown RBP13.06□□□□□ -0.32
SKA3-202ENST00000314759 CCNKO75909 580 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 LRATO95237 230 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 SEMG1P04279 462 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 FABP3P05413 133 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 ALPIP09923 528 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 ZDHHC11BP0C7U3 371 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 DGKAP23743 735 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
SKA3-202ENST00000314759 HMGCLP35914 325 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 PPP3CCP48454 512 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 CLK1P49759 484 aaKnown RBP13.06□□□□□ -0.32
SKA3-202ENST00000314759 ARF5P84085 180 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 SOWAHCQ53LP3 525 aaPredicted RBP13.06□□□□□ -0.32
SKA3-202ENST00000314759 NCEH1Q6PIU2 408 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 CERS6Q6ZMG9 384 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 DENND1CQ8IV53 801 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 BEND7Q8N7W2 519 aaPredicted RBP13.06□□□□□ -0.32
SKA3-202ENST00000314759 ATG16L2Q8NAA4 619 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 IPCEF1Q8WWN9 437 aaPredicted RBP13.06□□□□□ -0.32
SKA3-202ENST00000314759 DNASE1L2Q92874 299 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 SLC38A4Q969I6 547 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 ITPAQ9BY32 194 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 MMP27Q9H306 513 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 RNF167Q9H6Y7 350 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 ANKHQ9HCJ1 492 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 PLXNA4Q9HCM2 1894 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 METTL15A6NJ78 407 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 INPPL1O15357 1258 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 DUSP11O75319 330 aaKnown RBP13.06□□□□□ -0.32
SKA3-202ENST00000314759 PRAMEF1O95521 474 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 DBTP11182 482 aaKnown RBP13.06□□□□□ -0.32
SKA3-202ENST00000314759 AKR1A1P14550 325 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 EPORP19235 508 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 TRPC1P48995 793 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 ZNF181Q2M3W8 571 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 TTLL9Q3SXZ7 439 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 CLLU1OSQ5K130 101 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 GLB1LQ6UWU2 654 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 HORMAD1Q86X24 394 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 ENTHD1Q8IYW4 607 aa13.06□□□□□ -0.32
SKA3-202ENST00000314759 TRPV1Q8NER1 839 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms