RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 HMGN2P46Q86SG4 172 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 TSPEARQ8WU66 669 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 SLC35B4Q969S0 331 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 NACC2Q96BF6 587 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 PSKH2Q96QS6 385 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 ZNF221Q9UK13 617 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 URB1O60287 2271 aaKnown RBP13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 LOC285095A0A1B0GVY8 99 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 ERN1O75460 977 aaKnown RBP13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 CKMT1AP12532 417 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 DNAJA1P31689 397 aaKnown RBP13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 SLC16A1P53985 500 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 CREMQ03060 361 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 BTG3Q14201 252 aaPredicted RBP13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 DEF8Q6ZN54 512 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 B3GNT8Q7Z7M8 397 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 TMPRSS11BQ86T26 416 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 OR8J3Q8NGG0 315 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 ATL1Q8WXF7 558 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 TMEM159Q96B96 161 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 GPBP1L1Q9HC44 474 aaPredicted RBP13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 TAS2R16Q9NYV7 291 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 FZD4Q9ULV1 537 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 PCDHB8Q9UN66 801 aa13.94□□□□□ -0.18
CSNK1D-202ENST00000314028 A0A1B0GVM2 712 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 ANKDD1BA6NHY2 528 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 PSMD8P48556 350 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 ATAD3BQ5T9A4 648 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 KIAA1614Q5VZ46 1190 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 SUSD1Q6UWL2 747 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 DLEU7Q6UYE1 221 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 NEK10Q6ZWH5 1172 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 BEND7Q8N7W2 519 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 ENKURQ8TC29 256 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 PIH1D2Q8WWB5 315 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 PHF21AQ96BD5 680 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 FOPNLQ96NB1 174 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 GFM1Q96RP9 751 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 PKP4Q99569 1192 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 ITPAQ9BY32 194 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 OR51E2Q9H255 320 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 RAD18Q9NS91 495 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 LSM7Q9UK45 103 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 DHRS7Q9Y394 339 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 BOLA1Q9Y3E2 137 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 PCDHB1Q9Y5F3 818 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 TCRBV5S2A0A599 114 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 PRAMEF12O95522 483 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 PABPC1P11940 636 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 CDKN2CP42773 168 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 ATN1P54259 1190 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 GP2P55259 537 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 CDH4P55283 916 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 OR2B6P58173 313 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 TSTQ16762 297 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 CTSL3PQ5NE16 218 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 GLB1L3Q8NCI6 653 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 OR10G2Q8NGC3 310 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 APIPQ96GX9 242 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 C1orf74Q96LT6 269 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 BRD9Q9H8M2 597 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 SGK2Q9HBY8 427 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 ASCC3Q8N3C0 2202 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 AP2A2O94973 939 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 RPLP0P05388 317 aaKnown RBP13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 RAB15P59190 212 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 CDC42P60953 191 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 PLEKHG6Q3KR16 790 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 CASP12Q6UXS9 341 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 BHLHA9Q7RTU4 235 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 LMNTD1Q8N9Z9 388 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 ZNF548Q8NEK5 533 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 BPIFB1Q8TDL5 484 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 TSPAN18Q96SJ8 248 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 TPT1P8Q9HAU6 139 aa13.93□□□□□ -0.18
CSNK1D-202ENST00000314028 ARID2Q68CP9 1835 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 MYL12BO14950 172 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 EPOP01588 193 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 FPR1P21462 350 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 SERPINA4P29622 427 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 SLC6A4P31645 630 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 CSKP41240 450 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 PHC1P78364 1004 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 GSTM4Q03013 218 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 ST3GAL4Q11206 333 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 SF3B4Q15427 424 aaKnown RBP eCLIP13.92□□□□□ -0.184e-8■■■■□ 26.7
CSNK1D-202ENST00000314028 COQ5Q5HYK3 327 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 DESI1Q6ICB0 168 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 FAM131AQ6UXB0 335 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 TRMT11Q7Z4G4 463 aaKnown RBP13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 DDX53Q86TM3 631 aaKnown RBP13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 PHYKPLQ8IUZ5 450 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 ALDH16A1Q8IZ83 802 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 LGI4Q8N135 537 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 TCAIMQ8N3R3 496 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 ARL14EPQ8N8R7 260 aaPredicted RBP13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 FAM83FQ8NEG4 500 aaPredicted RBP13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 FEVQ99581 238 aa13.92□□□□□ -0.18
CSNK1D-202ENST00000314028 C2orf49Q9BVC5 232 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms