RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 TMEM9Q9P0T7 183 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 CDH7Q9ULB5 785 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 CFAP99D6REC4 459 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 WNT9AO14904 365 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 CREG1O75629 220 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 PDGFBP01127 241 aaPredicted RBP13.79□□□□□ -0.2
RAB40A-201ENST00000304236 C1SP09871 688 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 PCNAP12004 261 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 JUNBP17275 347 aaPredicted RBP13.79□□□□□ -0.2
RAB40A-201ENST00000304236 CTSOP43234 321 aaPredicted RBP13.79□□□□□ -0.2
RAB40A-201ENST00000304236 ABHD18Q0P651 414 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 ENPP6Q6UWR7 440 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 C8orf59Q8N0T1 100 aaPredicted RBP13.79□□□□□ -0.2
RAB40A-201ENST00000304236 PJA1Q8NG27 643 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 OR5K1Q8NHB7 308 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 MCOLN3Q8TDD5 553 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 GAB3Q8WWW8 586 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 C12orf43Q96C57 262 aaKnown RBP13.79□□□□□ -0.2
RAB40A-201ENST00000304236 MTFMTQ96DP5 389 aaKnown RBP13.79□□□□□ -0.2
RAB40A-201ENST00000304236 MUS81Q96NY9 551 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 OSBPL10Q9BXB5 764 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 IKZF5Q9H5V7 419 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 BRD9Q9H8M2 597 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 DNAJC11Q9NVH1 559 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 CIDEBQ9UHD4 219 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 PCDHB14Q9Y5E9 798 aa13.79□□□□□ -0.2
RAB40A-201ENST00000304236 GFYI3L273 518 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 AP2A2O94973 939 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 CYP2A6P11509 494 aaPredicted RBP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 ATP1B2P14415 290 aaPredicted RBP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 ZNF30P17039 623 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 LHCGRP22888 699 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 STK19P49842 368 aaPredicted RBP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 HSPA14Q0VDF9 509 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 GRSF1Q12849 480 aaKnown RBP eCLIP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 TCF15Q12870 199 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 PMS2P3Q13401 168 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 TOP3AQ13472 1001 aaPredicted RBP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 RAB39AQ14964 217 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 PLCL1Q15111 1095 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 PON2Q15165 354 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 RFX4Q33E94 735 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 PLA2G4EQ3MJ16 856 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 ZIK1Q3SY52 487 aaPredicted RBP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 BROXQ5VW32 411 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 GCNT7Q6ZNI0 430 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 HS6ST3Q8IZP7 471 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 EID3Q8N140 333 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 SMG7Q92540 1137 aaKnown RBP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 HDAC2Q92769 488 aaKnown RBP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 NCLNQ969V3 563 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 REXO5Q96IC2 774 aaKnown RBP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 TBCDQ9BTW9 1192 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 SOX17Q9H6I2 414 aaPredicted RBP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 ZDHHC6Q9H6R6 413 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 RAD18Q9NS91 495 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 PIEZO1Q92508 2521 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 TGM5O43548 720 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 PRMT3O60678 531 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 UGDHO60701 494 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 NOL3O60936 208 aaKnown RBP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 PRKD3O94806 890 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 CPNE6O95741 557 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 HLA-FP30511 346 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 GZMMP51124 257 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 PPP2R2BQ00005 443 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 BIRC2Q13490 618 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 TDGQ13569 410 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 TUBA3CQ13748 450 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 DMC1Q14565 340 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 DPY19L1Q2PZI1 675 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 DNAJC14Q6Y2X3 702 aaPredicted RBP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 HIPK1Q86Z02 1210 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 CROCCP3Q8IVE0 287 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 CMTM8Q8IZV2 173 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 ZCCHC7Q8N3Z6 543 aaKnown RBP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 CSGALNACT1Q8TDX6 532 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 SKA2Q8WVK7 121 aaPredicted RBP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 LZICQ8WZA0 190 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 NRBF2Q96F24 287 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 CARS2Q9HA77 564 aaKnown RBP13.78□□□□□ -0.2
RAB40A-201ENST00000304236 SERHLQ9NQF3 203 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 B4GALT6Q9UBX8 382 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 EBF1Q9UH73 591 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 DLGAP4Q9Y2H0 992 aa13.78□□□□□ -0.2
RAB40A-201ENST00000304236 WASH3PC4AMC7 463 aa13.77□□□□□ -0.21
RAB40A-201ENST00000304236 AREL1O15033 823 aa13.77□□□□□ -0.21
RAB40A-201ENST00000304236 BNIP3LO60238 219 aa13.77□□□□□ -0.21
RAB40A-201ENST00000304236 RFPL2O75678 378 aa13.77□□□□□ -0.21
RAB40A-201ENST00000304236 UGT2B4P06133 528 aa13.77□□□□□ -0.21
RAB40A-201ENST00000304236 TCF3P15923 654 aa13.77□□□□□ -0.21
RAB40A-201ENST00000304236 TRPC1P48995 793 aa13.77□□□□□ -0.21
RAB40A-201ENST00000304236 PHC1P78364 1004 aa13.77□□□□□ -0.21
RAB40A-201ENST00000304236 ABRQ12979 859 aa13.77□□□□□ -0.21
RAB40A-201ENST00000304236 NKG7Q16617 165 aa13.77□□□□□ -0.21
RAB40A-201ENST00000304236 PTCHD3Q3KNS1 767 aa13.77□□□□□ -0.21
RAB40A-201ENST00000304236 LIPJQ5W064 366 aa13.77□□□□□ -0.21
RAB40A-201ENST00000304236 FRG2Q64ET8 278 aa13.77□□□□□ -0.21
RAB40A-201ENST00000304236 GDPD4Q6W3E5 623 aa13.77□□□□□ -0.21
RAB40A-201ENST00000304236 DPY19L3Q6ZPD9 716 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms