RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 EIF4HQ15056 248 aaKnown RBP18.64■□□□□ 0.57
TRA2A-201ENST00000297071 DUOXA1Q1HG43 343 aa18.64■□□□□ 0.57
TRA2A-201ENST00000297071 INO80DQ53TQ3 878 aaPredicted RBP18.64■□□□□ 0.57
TRA2A-201ENST00000297071 CCDC71Q8IV32 467 aaPredicted RBP18.64■□□□□ 0.57
TRA2A-201ENST00000297071 POC5Q8NA72 575 aa18.64■□□□□ 0.57
TRA2A-201ENST00000297071 RPL3LQ92901 407 aaKnown RBP18.64■□□□□ 0.57
TRA2A-201ENST00000297071 ZNF486Q96H40 463 aaPredicted RBP18.64■□□□□ 0.57
TRA2A-201ENST00000297071 CIPCQ9C0C6 399 aa18.64■□□□□ 0.57
TRA2A-201ENST00000297071 ABCB10Q9NRK6 738 aa18.64■□□□□ 0.57
TRA2A-201ENST00000297071 FARSBQ9NSD9 589 aaKnown RBP18.64■□□□□ 0.57
TRA2A-201ENST00000297071 KIF17Q9P2E2 1029 aa18.64■□□□□ 0.57
TRA2A-201ENST00000297071 POU2F3Q9UKI9 436 aa18.64■□□□□ 0.57
TRA2A-201ENST00000297071 SAMHD1Q9Y3Z3 626 aaKnown RBP18.64■□□□□ 0.57
TRA2A-201ENST00000297071 KLK4Q9Y5K2 254 aa18.64■□□□□ 0.57
TRA2A-201ENST00000297071 LOC110117498-PIK3R3F6TDL0 507 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 RFXANKO14593 260 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 DUSP11O75319 330 aaKnown RBP18.63■□□□□ 0.57
TRA2A-201ENST00000297071 KCNK2O95069 426 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 MED26O95402 600 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 LCKP06239 509 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 CDK1P06493 297 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 HMBSP08397 361 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 CTSHP09668 335 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 MYCLP1P12525 358 aaPredicted RBP18.63■□□□□ 0.57
TRA2A-201ENST00000297071 CTPS1P17812 591 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 SLC6A4P31645 630 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 GRK4P32298 578 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 S100A5P33763 92 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 CASP3P42574 277 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 SRSF11Q05519 484 aaKnown RBP18.63■□□□□ 0.57
TRA2A-201ENST00000297071 IQCCQ4KMZ1 466 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 TPRG1LQ5T0D9 272 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 GPRC6AQ5T6X5 926 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 FAM171A1Q5VUB5 890 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 LRRC70Q7Z2Q7 622 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 ENTHD1Q8IYW4 607 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 PAF1Q8N7H5 531 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 C9orf43Q8TAL5 461 aaPredicted RBP18.63■□□□□ 0.57
TRA2A-201ENST00000297071 PIK3R3Q92569 461 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 PYCR2Q96C36 320 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 EGFL8Q99944 293 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 ADAM2Q99965 735 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 INPP5KQ9BT40 448 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 COPS4Q9BT78 406 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 ACPTQ9BZG2 426 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 SLC32A1Q9H598 525 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 SLCO3A1Q9UIG8 710 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 SNX6Q9UNH7 406 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 ZFP37Q9Y6Q3 630 aaPredicted RBP18.63■□□□□ 0.57
TRA2A-201ENST00000297071 ALPK3Q96L96 1907 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 IQCF5A8MTL0 148 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 FFAR3O14843 346 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 GPR42O15529 346 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 PCDHGA12O60330 932 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 STK16O75716 305 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 KCNK5O95279 499 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 ZNF682O95780 498 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 RHOCP08134 193 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 GGT2P36268 569 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 LIPAP38571 399 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 CAMK2GQ13555 558 aaPredicted RBP18.63■□□□□ 0.57
TRA2A-201ENST00000297071 MAPK11Q15759 364 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 NEK5Q6P3R8 708 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 DOK6Q6PKX4 331 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 ZNF551Q7Z340 670 aaPredicted RBP18.63■□□□□ 0.57
TRA2A-201ENST00000297071 P3H2Q8IVL5 708 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 ZBTB2Q8N680 514 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 EFHBQ8N7U6 833 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 CLSTN3Q9BQT9 956 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 SPON2Q9BUD6 331 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 CCDC32Q9BV29 185 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 CDADC1Q9BWV3 514 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 PCDH12Q9NPG4 1184 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 TRAPPC4Q9Y296 219 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 PCDHGC4Q9Y5F7 938 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 PCDHGB3Q9Y5G1 929 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 PCDHGA6Q9Y5G7 932 aa18.63■□□□□ 0.57
TRA2A-201ENST00000297071 PLXNB3Q9ULL4 1909 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 KCNE1BA0A087WTH5 132 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 PLK4O00444 970 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 EOMESO95936 686 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 PRPS1L1P21108 318 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 PPIBP23284 216 aaKnown RBP18.62■□□□□ 0.57
TRA2A-201ENST00000297071 NKX3-2P78367 333 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 VLDLRP98155 873 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.62■□□□□ 0.577e-9■□□□□ 11
TRA2A-201ENST00000297071 FAM26DQ5JW98 314 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 AHSA2Q719I0 299 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 SERPINA9Q86WD7 417 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 ZSWIM9Q86XI8 627 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 DNAJC22Q8N4W6 341 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 L3MBTL4Q8NA19 623 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 ATG16L2Q8NAA4 619 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 CSGALNACT1Q8TDX6 532 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 DNASE1L2Q92874 299 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 METTL2AQ96IZ6 378 aaKnown RBP18.62■□□□□ 0.57
TRA2A-201ENST00000297071 COL21A1Q96P44 957 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 TTLL2Q9BWV7 592 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 BPIFA1Q9NP55 256 aa18.62■□□□□ 0.57
TRA2A-201ENST00000297071 FAM120CQ9NX05 1096 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms