RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 KCNH4Q9UQ05 1017 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 GPSM3Q9Y4H4 160 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 RAI2Q9Y5P3 530 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 RALGAPA2Q2PPJ7 1873 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 WASH4PA8MWX3 477 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 LOC110117498-PIK3R3F6TDL0 507 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 ZW10O43264 779 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 PTHP01270 115 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 APOA1P02647 267 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 NRIP1P48552 1158 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 CLCN7P51798 805 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 RPS14P62263 151 aaKnown RBP12.56□□□□□ -0.4
COL8A1-202ENST00000273342 CDC20Q12834 499 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 TAF10Q12962 218 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 IL18R1Q13478 541 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 DMC1Q14565 340 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 MED22Q15528 200 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 ZNF181Q2M3W8 571 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 ZMAT1Q5H9K5 638 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 SPANXN2Q5MJ10 180 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 NADSYN1Q6IA69 706 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 CD300LGQ6UXG3 332 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 CYP4Z2PQ8N1L4 340 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 TADA1Q96BN2 335 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 PANX1Q96RD7 426 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 PKMYT1Q99640 499 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 CPPED1Q9BRF8 314 aaPredicted RBP12.56□□□□□ -0.4
COL8A1-202ENST00000273342 TSEN34Q9BSV6 310 aaKnown RBP12.56□□□□□ -0.4
COL8A1-202ENST00000273342 SERHLQ9NQF3 203 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 FBXL12Q9NXK8 326 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 NDRG4Q9ULP0 352 aaKnown RBP12.56□□□□□ -0.4
COL8A1-202ENST00000273342 ARIH1Q9Y4X5 557 aaPredicted RBP12.56□□□□□ -0.4
COL8A1-202ENST00000273342 PCDHB9Q9Y5E1 797 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 SMIM30A4D0T7 59 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 HOXC11O43248 304 aaPredicted RBP12.56□□□□□ -0.4
COL8A1-202ENST00000273342 SLC25A14O95258 325 aaPredicted RBP12.56□□□□□ -0.4
COL8A1-202ENST00000273342 MED26O95402 600 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 CXCR2P25025 360 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 HTR7P34969 479 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 OR1E2P47887 323 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 DDX39BQ13838 428 aaKnown RBP12.56□□□□□ -0.4
COL8A1-202ENST00000273342 PCBP1Q15365 356 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL8A1-202ENST00000273342 TAF1AQ15573 450 aaPredicted RBP12.56□□□□□ -0.4
COL8A1-202ENST00000273342 ARMCX4Q5H9R4 360 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 STX19Q8N4C7 294 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 IL17RDQ8NFM7 739 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 SELENOMQ8WWX9 145 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 BRI3BPQ8WY22 251 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 NECTIN4Q96NY8 510 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 IL1RAPQ9NPH3 570 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 NUDT4Q9NZJ9 180 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 PPT2Q9UMR5 302 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 PRSS21Q9Y6M0 314 aa12.56□□□□□ -0.4
COL8A1-202ENST00000273342 FNDC1Q4ZHG4 1894 aaPredicted RBP12.55□□□□□ -0.4
COL8A1-202ENST00000273342 INSIG1O15503 277 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 B4GALT3O60512 393 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 PDYNP01213 254 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 ENGP17813 658 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 DNAJA1P31689 397 aaKnown RBP12.55□□□□□ -0.4
COL8A1-202ENST00000273342 TRIM60Q495X7 471 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 USP39Q53GS9 565 aaKnown RBP12.55□□□□□ -0.4
COL8A1-202ENST00000273342 TSPYL5Q86VY4 417 aaPredicted RBP12.55□□□□□ -0.4
COL8A1-202ENST00000273342 CLECL1Q8IZS7 167 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 ZNF675Q8TD23 568 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 FBLIM1Q8WUP2 373 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 DEPDC7Q96QD5 511 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 SEPT5Q99719 369 aaPredicted RBP12.55□□□□□ -0.4
COL8A1-202ENST00000273342 TMEM246Q9BRR3 403 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 ACPTQ9BZG2 426 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 GPR63Q9BZJ6 419 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 RLIMQ9NVW2 624 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 PAQR5Q9NXK6 330 aaPredicted RBP12.55□□□□□ -0.4
COL8A1-202ENST00000273342 FLRT1Q9NZU1 646 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 OGDHLQ9ULD0 1010 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 GABRQQ9UN88 632 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 ZFP37Q9Y6Q3 630 aaPredicted RBP12.55□□□□□ -0.4
COL8A1-202ENST00000273342 EVPLLA8MZ36 301 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 H3BM21 787 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 GFRA2O00451 464 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 MANBAO00462 879 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 HAT1O14929 419 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 MRPL19P49406 292 aaKnown RBP12.55□□□□□ -0.4
COL8A1-202ENST00000273342 SMARCB1Q12824 385 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 NDUFA5Q16718 116 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 PARP15Q460N3 678 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 SPPL2AQ8TCT8 520 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 KCNJ9Q92806 393 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 SPATA17Q96L03 361 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 UBA2Q9UBT2 640 aaPredicted RBP12.55□□□□□ -0.4
COL8A1-202ENST00000273342 PCDHGA6Q9Y5G7 932 aa12.55□□□□□ -0.4
COL8A1-202ENST00000273342 ISPDA4D126 451 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 CLDN24A6NM45 220 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 ANKRD66B4E2M5 251 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 HAS3O00219 553 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 CCRL2O00421 344 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 IFRD1O00458 451 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 FPR1P21462 350 aa12.54□□□□□ -0.4
COL8A1-202ENST00000273342 HOXD9P28356 352 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 HOXD11P31277 338 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-202ENST00000273342 RRM2P31350 389 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms