RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 GHDCQ8N2G8 530 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 KLHL6Q8WZ60 621 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 ZSCAN5AQ9BUG6 496 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 PCDH10Q9P2E7 1040 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 RTTNQ86VV8 2226 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 ATP4BP51164 291 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 MXD1Q05195 221 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 SMYD5Q6GMV2 418 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF367Q7RTV3 350 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 FAM129CQ86XR2 697 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 KCTD13Q8WZ19 329 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 RIPOR3Q96MK2 946 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 COL21A1Q96P44 957 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 ACAT2Q9BWD1 397 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 B3GNT4Q9C0J1 378 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 RICTORQ6R327 1708 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 DNM1LO00429 736 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 IRAK2O43187 625 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 ATP6V1G1O75348 118 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 OR1D2P34982 312 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 TLR1Q15399 786 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 TARBP2Q15633 366 aaKnown RBP7.8□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF181Q2M3W8 571 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 ASTE1Q2TB18 679 aaPredicted RBP7.8□□□□□ -1.16
LIMD1-201ENST00000273317 PRPF38BQ5VTL8 546 aaKnown RBP7.8□□□□□ -1.16
LIMD1-201ENST00000273317 RAB12Q6IQ22 244 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 LRRN1Q6UXK5 716 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 IL31RAQ8NI17 732 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 EFCAB11Q9BUY7 163 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 METTL8Q9H825 291 aaKnown RBP7.8□□□□□ -1.16
LIMD1-201ENST00000273317 COMMD3Q9UBI1 195 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 LAMB4A4D0S4 1761 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 C9IYK1 514 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 PIAS1O75925 651 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 SELPP16109 830 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 MECP2P51608 486 aaKnown RBP7.8□□□□□ -1.16
LIMD1-201ENST00000273317 GJA9P57773 515 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 ENPP2Q13822 863 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 FASTKD3Q14CZ7 662 aaKnown RBP7.8□□□□□ -1.16
LIMD1-201ENST00000273317 NPTX1Q15818 432 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 RFWD3Q6PCD5 774 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 MAB21L3Q8N8X9 362 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 MOAP1Q96BY2 351 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 LMLNQ96KR4 655 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 PWWP2AQ96N64 755 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF641Q96N77 438 aaPredicted RBP7.8□□□□□ -1.16
LIMD1-201ENST00000273317 ABCG4Q9H172 646 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 MIR1-1HGQ9H1L0 117 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 RANBP3Q9H6Z4 567 aaPredicted RBP7.8□□□□□ -1.16
LIMD1-201ENST00000273317 NUP214P35658 2090 aaPredicted RBP7.8□□□□□ -1.16
LIMD1-201ENST00000273317 DBIP07108 87 aaKnown RBP7.8□□□□□ -1.16
LIMD1-201ENST00000273317 AOC1P19801 751 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 CAPZA1P52907 286 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 PLEKHN1Q494U1 663 aaPredicted RBP7.8□□□□□ -1.16
LIMD1-201ENST00000273317 PARGQ86W56 976 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 CFAP206Q8IYR0 622 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 LGI4Q8N135 537 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 POF1BQ8WVV4 589 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 HEPHQ9BQS7 1158 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 SCP2D1Q9UJQ7 156 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 CMAHPQ9Y471 501 aa7.8□□□□□ -1.16
LIMD1-201ENST00000273317 CDK14O94921 469 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 HPRP00739 348 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 RYKP34925 604 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 C1QTNF8P60827 252 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 CXCL17Q6UXB2 119 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 PDSS2Q86YH6 399 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 GPR151Q8TDV0 419 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 NUS1Q96E22 293 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 TVP23BQ9NYZ1 205 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 ABCD2Q9UBJ2 740 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 RNF6Q9Y252 685 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 TLR6Q9Y2C9 796 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 PEAK1Q9H792 1746 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 LRRN3E7EW58 273 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 AXIN1O15169 862 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 HSD11B1P28845 292 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 ALG1LQ6GMV1 187 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 GID4Q8IVV7 300 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 CFAP52Q8N1V2 620 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 NELFAQ9H3P2 528 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 LRRN3Q9H3W5 708 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 XKR8Q9H6D3 395 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 PCDHA2Q9Y5H9 948 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 TMEM150CB9EJG8 249 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 SCAMP3O14828 347 aaKnown RBP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 NOBOXO60393 691 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 SRCP12931 536 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 CPN2P22792 545 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 HNRNPDQ14103 355 aaKnown RBP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 SEC23BQ15437 767 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 CRB2Q5IJ48 1285 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 UBXN11Q5T124 520 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 ANKRD22Q5VYY1 191 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 TMEM214Q6NUQ4 689 aaKnown RBP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 SLC36A4Q6YBV0 504 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 DCDC5Q6ZRR9 648 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 RAB11FIP2Q7L804 512 aa7.79□□□□□ -1.16
LIMD1-201ENST00000273317 SMG8Q8ND04 991 aaKnown RBP7.79□□□□□ -1.16
LIMD1-201ENST00000273317 BTBD1Q9H0C5 482 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms