RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 FAM118AQ9NWS6 357 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 DYRK1BQ9Y463 629 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 PCDHGA10Q9Y5H3 936 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 A0A1W2PQ72 361 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 CDC7O00311 574 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 PLOD2O00469 737 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 ACOT8O14734 319 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 ADAMDEC1O15204 470 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 CCL16O15467 120 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 TEX28O15482 410 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 COCHO43405 550 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 NDUFB5O43674 189 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 ERN1O75460 977 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 YES1P07947 543 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 HNRNPA1P09651 372 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 CTPS1P17812 591 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 PPP2R1BP30154 601 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 MAP2K4P45985 399 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 KCNQ1P51787 676 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 AP1S1P61966 158 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 RPS7P62081 194 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 RPS14P62263 151 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 DEFB103AP81534 67 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 LAPTM4AQ15012 233 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 LINGO4Q6UY18 593 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 RBFAQ8N0V3 343 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 NSUN5Q96P11 429 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 IL12RB2Q99665 862 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 ATP13A3Q9H7F0 1226 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 ZNF222Q9UK12 451 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 PCDHGC4Q9Y5F7 938 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 CROCCQ5TZA2 2017 aa11.25□□□□□ -0.61
CLSTN3-201ENST00000266546 J3KR12 359 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 GRM6O15303 877 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 OR10H3O60404 316 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 NOS1APO75052 506 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 CREG1O75629 220 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 RFPL2O75678 378 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 HPRP00739 348 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 DCKP27707 260 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 OXTRP30559 389 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 DNAJA1P31689 397 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 ALDH9A1P49189 494 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 PPP5CP53041 499 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 HMGCS1Q01581 520 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 SERINC3Q13530 473 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 TUBA3EQ6PEY2 450 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 C11orf96Q7Z7L8 435 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 C14orf80Q86SX3 495 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 ADGRG5Q8IZF4 528 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 TCAIMQ8N3R3 496 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 ASCC1Q8N9N2 400 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 AUTS2Q8WXX7 1259 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 SLC39A13Q96H72 371 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 SH3YL1Q96HL8 342 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 CLSTN3Q9BQT9 956 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 NECTIN3Q9NQS3 549 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 CMTM6Q9NX76 183 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 RNF6Q9Y252 685 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 SLC1A7O00341 560 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 PSIP1O75475 530 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 C6orf136Q5SQH8 315 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 PIK3R6Q5UE93 754 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 FAM151BQ6UXP7 276 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 HDDC2Q7Z4H3 204 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 CACTIN-AS1Q8N1I8 211 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 OR8H1Q8NGG4 311 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 EFHD2Q96C19 240 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 ZNF641Q96N77 438 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 PKMYT1Q99640 499 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 AASDHPPTQ9NRN7 309 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 ERVK-18Q9QC07 812 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 ACOX3O15254 700 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 COQ9O75208 318 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 EPOP01588 193 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 RPS24P62847 133 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 SEMA3BQ13214 749 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 SH2D5Q6ZV89 423 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 CLIP4Q8N3C7 705 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 SMG7Q92540 1137 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 KIAA1191Q96A73 305 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 NACC2Q96BF6 587 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 RPL10LQ96L21 214 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 KLHL1Q9NR64 748 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 RAD18Q9NS91 495 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 SNTG1Q9NSN8 517 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 VPS4AQ9UN37 437 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 B3GNT3Q9Y2A9 372 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 CASKO14936 926 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 PER2O15055 1255 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 INSIG1O15503 277 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 PRAMEF11O60813 436 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 CLDN9O95484 217 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 ACADMP11310 421 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 PAICSP22234 425 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 GTF2E2P29084 291 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 NUDT6P53370 316 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 ZNF45Q02386 682 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 GPM6BQ13491 265 aa11.24□□□□□ -0.61
CLSTN3-201ENST00000266546 CCBE1Q6UXH8 406 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms