RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 TM9SF3Q9HD45 589 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 SLC22A14Q9Y267 594 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 SH3GLB1Q9Y371 365 aa14.81□□□□□ -0.04
DDX56-201ENST00000258772 IGLV3-16A0A075B6K0 115 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 FUOMA2VDF0 154 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 CLIC1O00299 241 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 AXIN1O15169 862 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 OLFM2O95897 454 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 FUCA1P04066 466 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 ACVR2AP27037 513 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 FMO3P31513 532 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 CD70P32970 193 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 OPRL1P41146 370 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 TRPC1P48995 793 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 CLK3P49761 638 aaKnown RBP14.8□□□□□ -0.04
DDX56-201ENST00000258772 MTAPQ13126 283 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 GBX1Q14549 363 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 ACOX1Q15067 660 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 PLEKHG6Q3KR16 790 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 PIWIL3Q7Z3Z3 882 aaKnown RBP14.8□□□□□ -0.04
DDX56-201ENST00000258772 B3GNT8Q7Z7M8 397 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 METTL3Q86U44 580 aaKnown RBP14.8□□□□□ -0.04
DDX56-201ENST00000258772 VRK3Q8IV63 474 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 PGBD3Q8N328 593 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 RIBC2Q9H4K1 309 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 DUSP21Q9H596 190 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 KIAA1522Q9P206 1035 aaPredicted RBP14.8□□□□□ -0.04
DDX56-201ENST00000258772 ERVK-18Q9QC07 812 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 AASSQ9UDR5 926 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 INTS6Q9UL03 887 aaKnown RBP14.8□□□□□ -0.04
DDX56-201ENST00000258772 SERTM1A2A2V5 107 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 MYO1GB0I1T2 1018 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 BOLA2-SMG1P6H3BVE0 249 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 NUAK1O60285 661 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 MAN1A2O60476 641 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 KCNK5O95279 499 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 SOD2P04179 222 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 CYP4B1P13584 511 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 ACPPP15309 386 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 JUNDP17535 347 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 LHCGRP22888 699 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 CD6P30203 668 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 CD97P48960 835 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 IL1RL1Q01638 556 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 KEAP1Q14145 624 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 NPTX1Q15818 432 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 DUOXA1Q1HG43 343 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 RGS21Q2M5E4 152 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 VMACQ2NL98 169 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 FRG2Q64ET8 278 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 CAPN13Q6MZZ7 669 aaPredicted RBP14.8□□□□□ -0.04
DDX56-201ENST00000258772 RBM12BQ8IXT5 1001 aaKnown RBP14.8□□□□□ -0.04
DDX56-201ENST00000258772 PARP8Q8N3A8 854 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 RORBQ92753 470 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 NELL1Q92832 810 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 ITFG2Q969R8 447 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 SCLYQ96I15 445 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 FRG2BQ96QU4 278 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 PANX1Q96RD7 426 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 P2RY13Q9BPV8 354 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 REXO4Q9GZR2 422 aaKnown RBP14.8□□□□□ -0.04
DDX56-201ENST00000258772 TPRKBQ9Y3C4 175 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 PPIL1Q9Y3C6 166 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 HSPE1-MOB4S4R3N1 261 aa14.8□□□□□ -0.04
DDX56-201ENST00000258772 OBSL1O75147 1896 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 FPGTO14772 594 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 ZSCAN9O15535 394 aaPredicted RBP14.79□□□□□ -0.04
DDX56-201ENST00000258772 SCN2BO60939 215 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 IMPDH2P12268 514 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 ENGP17813 658 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 GPX2P18283 190 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 PRPS1L1P21108 318 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 EPHB3P54753 998 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 CXCR4P61073 352 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 SNRPD1P62314 119 aaKnown RBP14.79□□□□□ -0.04
DDX56-201ENST00000258772 SLC35A2P78381 396 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 LAIR1Q6GTX8 287 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 CYP2U1Q7Z449 544 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 RNF175Q8N4F7 328 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 OR7A2PQ8NGA2 310 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 FIBINQ8TAL6 211 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 CSGALNACT1Q8TDX6 532 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 EBPLQ9BY08 206 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 SUV39H2Q9H5I1 410 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 IL21Q9HBE4 155 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 DNAJC11Q9NVH1 559 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 ERVW-1Q9UQF0 538 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 ERVK-11Q9UQG0 969 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 PCDHGA10Q9Y5H3 936 aa14.79□□□□□ -0.04
DDX56-201ENST00000258772 KRT87PA6NCN2 255 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 CLDN25C9JDP6 229 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 GFYI3L273 518 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 hCG_2039718K7EN88 272 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 PITPNM1O00562 1244 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 BNIP3LO60238 219 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 DIRAS1O95057 198 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 GABARAPO95166 117 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 SEMG1P04279 462 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 UGT2B4P06133 528 aa14.78□□□□□ -0.04
DDX56-201ENST00000258772 SRCP12931 536 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms