RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 CATSPEREQ5SY80 951 aa19.42■□□□□ 0.7
SNRPA-201ENST00000243563 THEMIS2Q5TEJ8 643 aa19.42■□□□□ 0.7
SNRPA-201ENST00000243563 LCTLQ6UWM7 567 aa19.42■□□□□ 0.7
SNRPA-201ENST00000243563 FRMD7Q6ZUT3 714 aa19.42■□□□□ 0.7
SNRPA-201ENST00000243563 RAB44Q7Z6P3 723 aaPredicted RBP19.42■□□□□ 0.7
SNRPA-201ENST00000243563 OR6C4Q8NGE1 309 aa19.42■□□□□ 0.7
SNRPA-201ENST00000243563 NCSTNQ92542 709 aa19.42■□□□□ 0.7
SNRPA-201ENST00000243563 CCDC126Q96EE4 140 aa19.42■□□□□ 0.7
SNRPA-201ENST00000243563 SHCBP1LQ9BZQ2 653 aa19.42■□□□□ 0.7
SNRPA-201ENST00000243563 KLHL25Q9H0H3 589 aa19.42■□□□□ 0.7
SNRPA-201ENST00000243563 SPNS1Q9H2V7 528 aa19.42■□□□□ 0.7
SNRPA-201ENST00000243563 POMT2Q9UKY4 750 aa19.42■□□□□ 0.7
SNRPA-201ENST00000243563 ZNF839A8K0R7 811 aa19.41■□□□□ 0.7
SNRPA-201ENST00000243563 TM4SF5O14894 197 aa19.41■□□□□ 0.7
SNRPA-201ENST00000243563 DUSP3P51452 185 aaPredicted RBP19.41■□□□□ 0.7
SNRPA-201ENST00000243563 CDC16Q13042 620 aa19.41■□□□□ 0.7
SNRPA-201ENST00000243563 PDK4Q16654 411 aa19.41■□□□□ 0.7
SNRPA-201ENST00000243563 ICE2Q659A1 982 aa19.41■□□□□ 0.7
SNRPA-201ENST00000243563 IRGCQ6NXR0 463 aa19.41■□□□□ 0.7
SNRPA-201ENST00000243563 ZNF574Q6ZN55 896 aaPredicted RBP19.41■□□□□ 0.7
SNRPA-201ENST00000243563 FAM92BQ6ZTR7 304 aa19.41■□□□□ 0.7
SNRPA-201ENST00000243563 OR2L3Q8NG85 312 aa19.41■□□□□ 0.7
SNRPA-201ENST00000243563 TRPC4APQ8TEL6 797 aa19.41■□□□□ 0.7
SNRPA-201ENST00000243563 CDK15Q96Q40 435 aa19.41■□□□□ 0.7
SNRPA-201ENST00000243563 LRRN3Q9H3W5 708 aa19.41■□□□□ 0.7
SNRPA-201ENST00000243563 NOL11Q9H8H0 719 aaKnown RBP19.41■□□□□ 0.7
SNRPA-201ENST00000243563 TNPO3Q9Y5L0 923 aaKnown RBP19.41■□□□□ 0.7
SNRPA-201ENST00000243563 MDC1Q14676 2089 aaKnown RBP19.41■□□□□ 0.7
SNRPA-201ENST00000243563 C2orf74A8MZ97 194 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 CAPN5O15484 640 aaPredicted RBP19.4■□□□□ 0.7
SNRPA-201ENST00000243563 CDH1P12830 882 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 CD22P20273 847 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 VARSP26640 1264 aaKnown RBP19.4■□□□□ 0.7
SNRPA-201ENST00000243563 PPM1FP49593 454 aaPredicted RBP19.4■□□□□ 0.7
SNRPA-201ENST00000243563 CLDN6P56747 220 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 CLCQ05315 142 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 BST1Q10588 318 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 KIR2DS3Q14952 304 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 SPESP1Q6UW49 350 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 TGM7Q96PF1 710 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 SYNDIG1Q9H7V2 258 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 IPPKQ9H8X2 491 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 SYNPO2LQ9H987 977 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 KLHL3Q9UH77 587 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 PCDHB11Q9Y5F2 797 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 TNFSF14O43557 240 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 DUX1O43812 170 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 SERPINE1P05121 402 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 GPLD1P80108 840 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 PRDX1Q06830 199 aaKnown RBP19.4■□□□□ 0.7
SNRPA-201ENST00000243563 TRAF3Q13114 568 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 SF1Q15637 639 aaKnown RBP19.4■□□□□ 0.7
SNRPA-201ENST00000243563 CCDC157Q569K6 752 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 CKAP2Q8WWK9 683 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 ZNF75CPQ92670 426 aaPredicted RBP19.4■□□□□ 0.7
SNRPA-201ENST00000243563 AHCYL2Q96HN2 611 aaKnown RBP19.4■□□□□ 0.7
SNRPA-201ENST00000243563 MAP3K3Q99759 626 aa19.4■□□□□ 0.7
SNRPA-201ENST00000243563 MN1Q10571 1320 aaPredicted RBP19.39■□□□□ 0.69
SNRPA-201ENST00000243563 POLR3GO15318 223 aaPredicted RBP19.39■□□□□ 0.69
SNRPA-201ENST00000243563 EPB42P16452 691 aa19.39■□□□□ 0.69
SNRPA-201ENST00000243563 CCND1P24385 295 aa19.39■□□□□ 0.69
SNRPA-201ENST00000243563 MEF2AQ02078 507 aaPredicted RBP19.39■□□□□ 0.69
SNRPA-201ENST00000243563 ZIC1Q15915 447 aa19.39■□□□□ 0.69
SNRPA-201ENST00000243563 SLCO4C1Q6ZQN7 724 aa19.39■□□□□ 0.69
SNRPA-201ENST00000243563 TMPRSS11BQ86T26 416 aa19.39■□□□□ 0.69
SNRPA-201ENST00000243563 SYVN1Q86TM6 617 aa19.39■□□□□ 0.69
SNRPA-201ENST00000243563 ARFGAP2Q8N6H7 521 aa19.39■□□□□ 0.69
SNRPA-201ENST00000243563 SLC5A11Q8WWX8 675 aa19.39■□□□□ 0.69
SNRPA-201ENST00000243563 SORT1Q99523 831 aa19.39■□□□□ 0.69
SNRPA-201ENST00000243563 NTN3O00634 580 aaPredicted RBP19.38■□□□□ 0.69
SNRPA-201ENST00000243563 GIPC1O14908 333 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 KATNA1O75449 491 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 C9P02748 559 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 ST6GAL1P15907 406 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 MAGP20916 626 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 GRIA3P42263 894 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 ERVPABLB-1P60509 514 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 SH3BP2P78314 561 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 PRKAA1Q13131 559 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 RCN2Q14257 317 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 RBBP7Q16576 425 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 ARL13AQ5H913 290 aaPredicted RBP19.38■□□□□ 0.69
SNRPA-201ENST00000243563 FCRL6Q6DN72 434 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 LETMD1Q6P1Q0 360 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 SLCO6A1Q86UG4 719 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 ZNF740Q8NDX6 193 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 NETO1Q8TDF5 533 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 PPP4R1Q8TF05 950 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 AGAP11Q8TF27 550 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 DYDC1Q8WWB3 177 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 KCNA7Q96RP8 456 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 CDC6Q99741 560 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 DRC3Q9H069 523 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 RAB33BQ9H082 229 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 MANSC1Q9H8J5 431 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 MRPS30Q9NP92 439 aaKnown RBP19.38■□□□□ 0.69
SNRPA-201ENST00000243563 EPHA6Q9UF33 1036 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 RNF11Q9Y3C5 154 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 ANGPTL3Q9Y5C1 460 aa19.38■□□□□ 0.69
SNRPA-201ENST00000243563 ENTPD2Q9Y5L3 495 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms