RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 FCGR1BQ92637 280 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 QRFPRQ96P65 431 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 TBL1YQ9BQ87 522 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 CCM2Q9BSQ5 444 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 PORCNQ9H237 461 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 REEP1Q9H902 201 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 VPS9D1Q9Y2B5 631 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 NAALAD2Q9Y3Q0 740 aa14.29□□□□□ -0.12
PTPRA-201ENST00000216877 NUP205Q92621 2012 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 TRAV6A0A075B6T7 132 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 FAM72CH0Y354 149 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 KDM4BO94953 1096 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 CDRT1O95170 752 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 PAPSS2O95340 614 aaPredicted RBP14.28□□□□□ -0.12
PTPRA-201ENST00000216877 AQP1P29972 269 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 SLC19A1P41440 591 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 CSTF3Q12996 717 aaKnown RBP14.28□□□□□ -0.12
PTPRA-201ENST00000216877 DSG2Q14126 1118 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 FAM174BQ3ZCQ3 159 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 FAM72AQ5TYM5 149 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 FAM72DQ6L9T8 149 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 FAM171BQ6P995 826 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 FAM72BQ86X60 149 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 METTL6Q8TCB7 284 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 NETO1Q8TDF5 533 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 ZNF583Q96ND8 569 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 SLC9A7Q96T83 725 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 BEX1Q9HBH7 125 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 STARD7Q9NQZ5 370 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 GALPQ9UBC7 116 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 DIMT1Q9UNQ2 313 aaKnown RBP14.28□□□□□ -0.12
PTPRA-201ENST00000216877 SESN1Q9Y6P5 492 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 PTPRFP10586 1907 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 FZD9O00144 591 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 SLC16A6O15403 523 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 OR4F21O95013 312 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 SLC2A2P11168 524 aaPredicted RBP14.28□□□□□ -0.12
PTPRA-201ENST00000216877 RPS19P39019 145 aaKnown RBP14.28□□□□□ -0.12
PTPRA-201ENST00000216877 RORCP51449 518 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 RABGGTBP53611 331 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 PTPN5P54829 565 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 IL18Q14116 193 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 SNX20Q7Z614 316 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 OR9Q1Q8NGQ5 310 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 FOPNLQ96NB1 174 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 SIX4Q9UIU6 781 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 A0A0B4J293 547 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 A0A1W2PQL4 384 aaPredicted RBP14.28□□□□□ -0.12
PTPRA-201ENST00000216877 PIPSLA2A3N6 862 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 ISM1B1AKI9 464 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 INMT-MINDY4F8WBC2 141 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 PER2O15055 1255 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 NBNO60934 754 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 PRKAR1AP10644 381 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 SOX3P41225 446 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 AGTR2P50052 363 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 LRRC66Q68CR7 880 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 ATP6V1C2Q8NEY4 427 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 PJA1Q8NG27 643 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 RNF31Q96EP0 1072 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 DCLRE1CQ96SD1 692 aaKnown RBP14.28□□□□□ -0.12
PTPRA-201ENST00000216877 NIPAL2Q9H841 368 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 ABCG2Q9UNQ0 655 aa14.28□□□□□ -0.12
PTPRA-201ENST00000216877 TRAV20A0A0B4J274 112 aa14.27□□□□□ -0.12
PTPRA-201ENST00000216877 FAM234BA2RU67 622 aa14.27□□□□□ -0.12
PTPRA-201ENST00000216877 LINC01387J3KSC0 135 aa14.27□□□□□ -0.12
PTPRA-201ENST00000216877 LGALS8O00214 317 aa14.27□□□□□ -0.12
PTPRA-201ENST00000216877 ORC5O43913 435 aa14.27□□□□□ -0.12
PTPRA-201ENST00000216877 MATN4O95460 622 aa14.27□□□□□ -0.12
PTPRA-201ENST00000216877 APOC3P02656 99 aa14.27□□□□□ -0.12
PTPRA-201ENST00000216877 STAT5BP51692 787 aa14.27□□□□□ -0.12
PTPRA-201ENST00000216877 ARHGDIBP52566 201 aa14.27□□□□□ -0.12
PTPRA-201ENST00000216877 SP2Q02086 613 aa14.27□□□□□ -0.12
PTPRA-201ENST00000216877 ZSWIM7Q19AV6 140 aa14.27□□□□□ -0.12
PTPRA-201ENST00000216877 INO80DQ53TQ3 878 aaPredicted RBP14.27□□□□□ -0.12
PTPRA-201ENST00000216877 NDUFAF5Q5TEU4 345 aa14.27□□□□□ -0.12
PTPRA-201ENST00000216877 OR10Z1Q8NGY1 313 aa14.27□□□□□ -0.12
PTPRA-201ENST00000216877 SPASTQ9UBP0 616 aa14.27□□□□□ -0.12
PTPRA-201ENST00000216877 ZNF98A6NK75 572 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 C9P02748 559 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 APEX1P27695 318 aaKnown RBP14.27□□□□□ -0.13
PTPRA-201ENST00000216877 CAP2P40123 477 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 RPL38P63173 70 aaKnown RBP14.27□□□□□ -0.13
PTPRA-201ENST00000216877 ANGPT1Q15389 498 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 FAM160B1Q5W0V3 765 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 MOB2Q70IA6 237 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 METTL3Q86U44 580 aaKnown RBP14.27□□□□□ -0.13
PTPRA-201ENST00000216877 RBCK1Q9BYM8 510 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 CATSPERBQ9H7T0 1116 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 AIG1Q9NVV5 245 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 FFAR3O14843 346 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 GPR42O15529 346 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 ATG13O75143 517 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 IFNA7P01567 189 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 GLAP06280 429 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 KCNQ1P51787 676 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 EPHA5P54756 1037 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 FAM189BP81408 668 aa14.27□□□□□ -0.13
PTPRA-201ENST00000216877 HYAL2Q12891 473 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms