RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SLC38A2Q96QD8 506 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 APOOQ9BUR5 198 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 HAPLN2Q9GZV7 340 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 CACNA1SQ13698 1873 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 K7EPI3 171 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 BTN3A3O00478 584 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 CST1P01037 141 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 TSPAN19P0C672 248 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 CHRM1P11229 460 aaPredicted RBP13.39□□□□□ -0.27
SIX4-201ENST00000216513 SRCP12931 536 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 GABRB2P47870 512 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 PSME3P61289 254 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 NFKB2Q00653 900 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 ZNF33AQ06730 810 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 GCNT6Q5T4J0 391 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 RAB43Q86YS6 212 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 MOCOSQ96EN8 888 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 SERHL2Q9H4I8 314 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 SERHLQ9NQF3 203 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 ENOPH1Q9UHY7 261 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 SUV39H1O43463 412 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 ZNF41P51814 821 aaPredicted RBP13.39□□□□□ -0.27
SIX4-201ENST00000216513 FAM26DQ5JW98 314 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 FAM69BQ5VUD6 431 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 CDC73Q6P1J9 531 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 KLHL17Q6TDP4 642 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 ADGRD2Q7Z7M1 963 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 ZNF605Q86T29 641 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 UBALD2Q8IYN6 164 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 ATXN2LQ8WWM7 1075 aaKnown RBP13.39□□□□□ -0.27
SIX4-201ENST00000216513 ZBED6CLQ96FA7 236 aaPredicted RBP13.39□□□□□ -0.27
SIX4-201ENST00000216513 ARRDC1-AS1Q9H2J1 176 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 B4GALT7Q9UBV7 327 aa13.39□□□□□ -0.27
SIX4-201ENST00000216513 MYL12BO14950 172 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 DRD4P21917 467 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 CXCR1P25024 350 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 HNMTP50135 292 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 SIM1P81133 766 aaPredicted RBP13.38□□□□□ -0.27
SIX4-201ENST00000216513 ABHD17BQ5VST6 288 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 LHX8Q68G74 356 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 ZDHHC13Q8IUH4 622 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 SNIP1Q8TAD8 396 aaKnown RBP13.38□□□□□ -0.27
SIX4-201ENST00000216513 UTS2RQ9UKP6 389 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 CCL26Q9Y258 94 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 CSNK2A2P19784 350 aaPredicted RBP13.38□□□□□ -0.27
SIX4-201ENST00000216513 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.38□□□□□ -0.27
SIX4-201ENST00000216513 ARMCX4Q5H9R4 360 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 C6orf52Q5T4I8 152 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 SLC22A15Q8IZD6 547 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 RP9Q8TA86 221 aaKnown RBP13.38□□□□□ -0.27
SIX4-201ENST00000216513 ZNF483Q8TF39 744 aaPredicted RBP13.38□□□□□ -0.27
SIX4-201ENST00000216513 SLC5A11Q8WWX8 675 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 NKD2Q969F2 451 aaPredicted RBP13.38□□□□□ -0.27
SIX4-201ENST00000216513 TMA7Q9Y2S6 64 aaKnown RBP13.38□□□□□ -0.27
SIX4-201ENST00000216513 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.38□□□□□ -0.27
SIX4-201ENST00000216513 PSMD9O00233 223 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 PPIBP23284 216 aaKnown RBP13.38□□□□□ -0.27
SIX4-201ENST00000216513 ACTL7AQ9Y615 435 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 OAS1P00973 400 aaKnown RBP13.38□□□□□ -0.27
SIX4-201ENST00000216513 DMPKQ09013 629 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 SAMD4BQ5PRF9 694 aaKnown RBP13.38□□□□□ -0.27
SIX4-201ENST00000216513 TNFAIP8L2Q6P589 184 aaPredicted RBP13.38□□□□□ -0.27
SIX4-201ENST00000216513 TRIM39Q9HCM9 518 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 GLOD5A6NK44 160 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 SNX4O95219 450 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 GBAP04062 536 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 LINGO3P0C6S8 592 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 CLUP10909 449 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 AFF3P51826 1226 aaKnown RBP13.38□□□□□ -0.27
SIX4-201ENST00000216513 RAB14P61106 215 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 SRYQ05066 204 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 RIN1Q13671 783 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.38□□□□□ -0.27
SIX4-201ENST00000216513 NPAS3Q8IXF0 933 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 UBQLNLQ8IYU4 475 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 NIPA2Q8N8Q9 360 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 EFCAB11Q9BUY7 163 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 PTGES2Q9H7Z7 377 aa13.38□□□□□ -0.27
SIX4-201ENST00000216513 PAIP2BQ9ULR5 123 aaKnown RBP13.38□□□□□ -0.27
SIX4-201ENST00000216513 C2CD4DB7Z1M9 353 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 CASKO14936 926 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 HNRNPH3P31942 346 aaKnown RBP13.37□□□□□ -0.27
SIX4-201ENST00000216513 LIMK2P53671 638 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 LGALS3BPQ08380 585 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 GPR107Q5VW38 600 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 EEF1AKMT1Q8WVE0 214 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 C17orf62Q9BQA9 187 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 SLC6A17Q9H1V8 727 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 ZNF395Q9H8N7 513 aaPredicted RBP13.37□□□□□ -0.27
SIX4-201ENST00000216513 EFCAB7A8K855 629 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 E7EQ34 232 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 KPNA4O00629 521 aaPredicted RBP13.37□□□□□ -0.27
SIX4-201ENST00000216513 ATF6P18850 670 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 TALDO1P37837 337 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 TAS2R39P59534 338 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 DECR1Q16698 335 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 TRMT5Q32P41 509 aaKnown RBP13.37□□□□□ -0.27
SIX4-201ENST00000216513 C3orf38Q5JPI3 329 aa13.37□□□□□ -0.27
SIX4-201ENST00000216513 TRMT10BQ6PF06 316 aaKnown RBP13.37□□□□□ -0.27
SIX4-201ENST00000216513 TMEM173Q86WV6 379 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms