RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 GTF2H4Q92759 462 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 NEIL2Q969S2 332 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 APIPQ96GX9 242 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 LRGUKQ96M69 825 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 TIMM29Q9BSF4 260 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 SLC17A9Q9BYT1 436 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 KLHL4Q9C0H6 718 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 ALG2Q9H553 416 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 SLAMF8Q9P0V8 285 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 ASF1AQ9Y294 204 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 SLC17A4Q9Y2C5 497 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 MAN2B2Q9Y2E5 1009 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 DYRK1BQ9Y463 629 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 NEUROG3Q9Y4Z2 214 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 AP4S1Q9Y587 144 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 PIAS3Q9Y6X2 628 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 TRPM6Q9BX84 2022 aa13.85□□□□□ -0.19
RTFDC1-201ENST00000023939 RNGTTO60942 597 aaKnown RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 KCNH1O95259 989 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 HOXC4P09017 264 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 C1GALT1C1LP0DN25 315 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 GLULP15104 373 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 SFSWAPQ12872 951 aaKnown RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 LAPTM5Q13571 262 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 PON2Q15165 354 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 TRIP10Q15642 601 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 PLA2G4EQ3MJ16 856 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 PAGE2BQ5JRK9 111 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 SPANXN4Q5MJ08 99 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 NOXRED1Q6NXP6 359 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 MED27Q6P2C8 311 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 IZUMO2Q6UXV1 221 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 LAS2Q8IYD9 372 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 CATSPER1Q8NEC5 780 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 ADCY4Q8NFM4 1077 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 OR7G3Q8NG95 312 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 OR5K2Q8NHB8 316 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 OR14C36Q8NHC7 312 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 GANCQ8TET4 914 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 TFGQ92734 400 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 TMEM74Q96NL1 305 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 PRO3102Q9H379 93 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 SGK2Q9HBY8 427 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 CCDC177Q9NQR7 707 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 ARMC1Q9NVT9 282 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 SIRT5Q9NXA8 310 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 RUVBL1Q9Y265 456 aaKnown RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 PRKAB1Q9Y478 270 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 TMEM265A0A087WTH1 108 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 PRR19A6NJB7 356 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 FOXE1O00358 373 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 RPSAP08865 295 aaKnown RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 PRPS1L1P21108 318 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 ATP6V1B2P21281 511 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 PEX2P28328 305 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 MAPKAPK3Q16644 382 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 CYP2A13Q16696 494 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 DPY19L1Q2PZI1 675 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 AASDHQ4L235 1098 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 LRIF1Q5T3J3 769 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 CAPRIN2Q6IMN6 1127 aaKnown RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 LCTLQ6UWM7 567 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 PDSS2Q86YH6 399 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 LILRA2Q8N149 483 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 KRTCAP2Q8N6L1 136 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 TMEM102Q8N9M5 508 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 SPDYE1Q8NFV5 336 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 SLC5A11Q8WWX8 675 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 SLCO4A1Q96BD0 722 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 SCARF2Q96GP6 870 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 APOLD1Q96LR9 279 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 SH3GL1Q99961 368 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 KCTD14Q9BQ13 255 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 HAUS8Q9BT25 410 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 EFHD1Q9BUP0 239 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 SPATA7Q9P0W8 599 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 GMPR2Q9P2T1 348 aaKnown RBP13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 PPT2Q9UMR5 302 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 MAPRE3Q9UPY8 281 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 OR1A2Q9Y585 309 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 SNX13Q9Y5W8 968 aa13.84□□□□□ -0.19
RTFDC1-201ENST00000023939 TRBV5-3A0A0A0MS03 114 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 ZNF839A8K0R7 811 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 ARPC2O15144 300 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 ERN1O75460 977 aaKnown RBP13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 TACR1P25103 407 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 IGFALSP35858 605 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 ATXN3P54252 364 aaPredicted RBP13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 CTBSQ01459 385 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 MTAPQ13126 283 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 FBXO43Q4G163 708 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 LPCAT4Q643R3 524 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 NXPE4Q6UWF7 544 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 TICAM1Q8IUC6 712 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 PLCD3Q8N3E9 789 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 SLC44A3Q8N4M1 653 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 CHTF18Q8WVB6 975 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 STARD8Q92502 1023 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 UBE2E3Q969T4 207 aa13.83□□□□□ -0.2
RTFDC1-201ENST00000023939 SIPA1Q96FS4 1042 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms