RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Snapc1Q8K0S9 389 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Gsg1Q8R1W2 324 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Olfr525Q8VGL5 309 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Golga7Q91W53 137 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Pcdhb8Q91XZ2 779 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Mrpl1Q99N96 336 aaKnown RBP22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Cyp2u1Q9CX98 530 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Zswim2Q9D9X6 631 aa22.22■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Gm3173A6NAS3 172 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Gm3020E9Q3J7 150 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Tcea3P23881 347 aaKnown RBP22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 InhbcP55104 352 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Tbx1P70323 479 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Msto1Q2YDW2 556 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Armcx5Q3UZB0 606 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 XpaQ64267 272 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Dna2Q6ZQJ5 1062 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Sfrp1Q8C4U3 314 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Gm3411Q8C7R2 150 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Slc46a2Q8CA03 479 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Tmco1Q921L3 188 aaKnown RBP22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Trim33Q99PP7 1142 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Tomm70Q9CZW5 611 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Susd3Q9D176 269 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Fiz1Q9WTJ4 500 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Chek2Q9Z265 546 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Gm29776A0A286YEC0 699 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 JhyE9Q793 770 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Cyp1a1P00184 524 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 P01665 111 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 P01666 111 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 LcatP16301 438 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 CcnfP51944 777 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Cdh5P55284 784 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Pip5k1bP70181 539 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Gdf3Q07104 366 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Vat1Q62465 406 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Catsper3Q80W99 395 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Olfr382Q8VF79 312 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Olfr1Q8VGI1 314 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Chst15Q91XQ5 561 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Clcc1Q99LI2 539 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Slco6d1Q9D5W6 683 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Mrpl17Q9D8P4 176 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Nectin1Q9JKF6 515 aa22.21■■□□□ 1.15
Upf3a-201ENSMUST00000043767 Gm43518A0A0G2JGB6 165 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Fbxo47A2A6H3 451 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Fam131cA2ADB2 273 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Cped1B2RX70 1026 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Gm29394H3BIW7 199 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 OstnP61364 130 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Grin2cQ01098 1239 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Adrbk2Q3UYH7 688 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Mep1bQ61847 704 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Cep78Q6IRU7 790 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Tnpo3Q6P2B1 923 aaKnown RBP22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Olfr792Q7TRH9 311 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Olfr384Q7TRX8 312 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 CslQ80X68 466 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Tmem198Q8BG75 360 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Stk25Q9Z2W1 426 aa22.2■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Olfr634-ps1A0A1B0GRN7 318 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Vmn1r2A2AMT6 306 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Gm4871D3Z0W7 314 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Gm1110F6Y113 635 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 OmdO35103 423 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Kpna4O35343 521 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Dgcr6O35347 198 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Rpl10lP86048 214 aaKnown RBP22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 BtrcQ3ULA2 605 aaKnown RBP22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 4930438A08RikQ5SPH3 536 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 OmpQ64288 163 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Magee1Q6PCZ4 918 aaKnown RBP22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Rpl10Q6ZWV3 214 aaKnown RBP22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Gpr139Q80UC8 345 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Clic5Q8BXK9 251 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Bhlhe22Q8C6A8 355 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Cdc16Q8R349 620 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Slc22a6Q8VC69 545 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 HnmtQ91VF2 295 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Col26a1Q91VF6 440 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Pacsin3Q99JB8 424 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Spata1Q9D5R4 444 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Clic3Q9D7P7 237 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Abt1Q9QYL7 269 aaKnown RBP22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Adam23Q9R1V7 829 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Plxnd1Q3UH93 1925 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Gm28168A0A087WNP1 180 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Znf711A2ANX9 761 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 RfngO09009 332 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Azin1O35484 448 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Eno2P17183 434 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Chrm4P32211 479 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Msx2Q03358 267 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Coq10bQ3THF9 240 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Hspa1aQ61696 641 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Tbccd1Q640P7 552 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Larp4bQ6A0A2 741 aaKnown RBP22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Cfap20Q8BTU1 193 aa22.19■■□□□ 1.14
Upf3a-201ENSMUST00000043767 Mark4Q8CIP4 752 aa22.19■■□□□ 1.14
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms