RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Btbd1P58544 488 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 CenplQ3U3S3 329 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Cd6Q61003 665 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 DbhQ64237 622 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Shkbp1Q6P7W2 704 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ranbp10Q6VN19 620 aaKnown RBP15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr1288Q7TQY0 312 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr1414Q8VGU5 312 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Duoxa2Q9D311 320 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 ScelQ9EQG3 652 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Sirpb1aA0A0A6YYP6 397 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Sppl2cA2A6C4 690 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr1006A2ALD2 312 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ifi213D3Z5G0 586 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 PahP16331 453 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Rps17P63276 135 aaKnown RBP15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Crisp1Q03401 244 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Fam47cQ14BE7 430 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Lmf1Q3U3R4 574 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Nudcd1Q6PIP5 582 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Zfp940Q8R2Q3 566 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr1208Q8VG47 308 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Slc15a4Q91W98 574 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Serpinb1aQ9D154 379 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 IL36RNQ9QYY1 156 aa15.81■□□□□ 0.12
Trim28-201ENSMUST00000005705 Wdfy3Q6VNB8 3508 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ranbp2Q9ERU9 3053 aaKnown RBP15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Prrg1A2BFE8 218 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Hoxa9P09631 271 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Fv4P11370 679 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 CskP41241 450 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Idh2P54071 452 aaKnown RBP15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Arpc4P59999 168 aaKnown RBP15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 CkbQ04447 381 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Hp1bp3Q3TEA8 554 aaKnown RBP15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Dnajc15Q78YY6 149 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ppm1nQ8BGL1 404 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Q8BHR8 331 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Mfsd6Q8CBH5 775 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Tmem161aQ8VCA6 480 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Cers2Q924Z4 380 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Dusp26Q9D700 211 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Yipf5Q9EQQ2 257 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 PalmdQ9JHU2 551 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Spry1Q9QXV9 313 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Umodl1Q5DID3 1319 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Pld3O35405 488 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Matn3O35701 481 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Aldh1a1P24549 501 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Isl1P61372 349 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ptpn2Q06180 406 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Smim24Q0VG18 120 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 ChdhQ8BJ64 596 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ppp1r3eQ8BRJ4 279 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Rbm4Q8C7Q4 361 aaKnown RBP15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Zbtb20Q8K0L9 741 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Rbm4bQ8VE92 357 aaKnown RBP15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Mat2bQ99LB6 334 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Pdzd3Q99MJ6 498 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Mrps18bQ99N84 254 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Fam32aQ9CR80 112 aaKnown RBP15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ints11Q9CWS4 600 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Tex22Q9D9U4 189 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Trim39Q9ESN2 488 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Nufip1Q9QXX8 484 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Sae1Q9R1T2 350 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Dock8Q8C147 2100 aa15.8■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ms4a4aA0A087WRT7 236 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Gm3138K7N754 218 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Hsd17b10O08756 261 aaKnown RBP15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Cxcr3O88410 367 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Eno2P17183 434 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Arf5P84084 180 aaKnown RBP15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Abi3Q8BYZ1 367 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Gpr22Q8BZL4 432 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Vmn1r214Q8R279 367 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Pus10Q9D3U0 527 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Spatc1lQ9D9W0 342 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Dap3Q9ER88 391 aaKnown RBP15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Elovl2Q9JLJ4 292 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Maged1Q9QYH6 775 aaKnown RBP15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Map2k5Q9WVS7 448 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Skint7A7XV04 395 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Shisa8J3QNX5 399 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Gm5724L7N264 670 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Orm2P07361 207 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Dsc3P55850 896 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Itgb8Q0VBD0 767 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Esrp1Q3US41 680 aaKnown RBP15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Zc3h12aQ5D1E7 596 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Bhlha9Q5RJB0 231 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 AbrQ5SSL4 859 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Dsg4Q7TMD7 1041 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Adgrd1Q80T32 903 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Rpp38Q80UU2 280 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Znf410Q8BKX7 478 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Nrip1Q8CBD1 1161 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Mfsd14bQ8CIA9 507 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 GlyatQ91XE0 296 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Asb9Q91ZT8 290 aa15.79■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms