RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 TMEM247A6NEH6 219 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 TMEM221A6NGB7 291 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 hCG_2039718K7EN88 272 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 PRAMEF4O60810 478 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 TRBC1P01850 177 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 ITGAMP11215 1152 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 SDC1P18827 310 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 ITGALP20701 1170 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 TGFBR1P36897 503 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 RPIAP49247 311 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 SLC35A2P78381 396 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 ZXDBP98169 803 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 GPNMBQ14956 572 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 TRIM16LQ309B1 348 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 CCDC92Q53HC0 331 aaPredicted RBP13.46□□□□□ -0.25
PHGDH-233ENST00000642021 PRAMEF9Q5VWM5 478 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 OR4F3Q6IEY1 312 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 ANKS3Q6ZW76 656 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 VTCN1Q7Z7D3 282 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 DBF4BQ8NFT6 615 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 OR7A2PQ8NGA2 310 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 TAMM41Q96BW9 452 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 REXO5Q96IC2 774 aaKnown RBP13.46□□□□□ -0.25
PHGDH-233ENST00000642021 DNMT3BQ9UBC3 853 aaKnown RBP13.46□□□□□ -0.25
PHGDH-233ENST00000642021 DAPK2Q9UIK4 370 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 CRLS1Q9UJA2 301 aa13.46□□□□□ -0.25
PHGDH-233ENST00000642021 GLYATL1P3A0A0U1RQE8 302 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 MYO1GB0I1T2 1018 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 JRKO75564 520 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 IL1RNP18510 177 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 FUT4P22083 530 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 CST5P28325 142 aaPredicted RBP13.46□□□□□ -0.26
PHGDH-233ENST00000642021 VLDLRP98155 873 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 OCA2Q04671 838 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 ABHD18Q0P651 414 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 SMARCB1Q12824 385 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 ZNF846Q147U1 533 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 MACC1Q6ZN28 852 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 CCDC81Q6ZN84 652 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 TMEM132CQ8N3T6 1108 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 BEND7Q8N7W2 519 aaPredicted RBP13.46□□□□□ -0.26
PHGDH-233ENST00000642021 PCSK9Q8NBP7 692 aaKnown RBP13.46□□□□□ -0.26
PHGDH-233ENST00000642021 RORBQ92753 470 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 CEP295NLQ96MC4 621 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 AASDHPPTQ9NRN7 309 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 PCDHB7Q9Y5E2 793 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 ORC6Q9Y5N6 252 aa13.46□□□□□ -0.26
PHGDH-233ENST00000642021 TMEM88BA6NKF7 163 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 H7C4K7 107 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 WNT9AO14904 365 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 KRT6AP02538 564 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 KRT6BP04259 564 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 HOXA9P31269 272 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 KRT6CP48668 564 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 NCS1P62166 190 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 IL18R1Q13478 541 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 RFX4Q33E94 735 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 PAGE2BQ5JRK9 111 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 TMEM236Q5W0B7 351 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 KDM4DQ6B0I6 523 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 RFLNAQ6ZTI6 216 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 CCDC71Q8IV32 467 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-233ENST00000642021 PAF1Q8N7H5 531 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 GPR26Q8NDV2 337 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 GLMNQ92990 594 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 YIPF6Q96EC8 236 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 MROQ9BYG7 248 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 ATP13A3Q9H7F0 1226 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 RDH14Q9HBH5 336 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 IL1RAPQ9NPH3 570 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 THG1LQ9NWX6 298 aaKnown RBP13.45□□□□□ -0.26
PHGDH-233ENST00000642021 ARL15Q9NXU5 204 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 TRPM5Q9NZQ8 1165 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 WDR37Q9Y2I8 494 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 PIKFYVEQ9Y2I7 2098 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 RFXANKO14593 260 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 DNAJB5O75953 348 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 NADKO95544 446 aaPredicted RBP13.45□□□□□ -0.26
PHGDH-233ENST00000642021 MT-ND2P03891 347 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 CCR7P32248 378 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 TCTN1Q2MV58 587 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 OR2T5Q6IEZ7 315 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 ZCCHC8Q6NZY4 707 aaKnown RBP13.45□□□□□ -0.26
PHGDH-233ENST00000642021 NEK5Q6P3R8 708 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 OR2T29Q8NH02 315 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 C2orf15Q8WU43 125 aaKnown RBP13.45□□□□□ -0.26
PHGDH-233ENST00000642021 RPL3LQ92901 407 aaKnown RBP13.45□□□□□ -0.26
PHGDH-233ENST00000642021 VMP1Q96GC9 406 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 APOLD1Q96LR9 279 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 BTBD2Q9BX70 525 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 SLC32A1Q9H598 525 aa13.45□□□□□ -0.26
PHGDH-233ENST00000642021 ANXA5P08758 320 aa13.44□□□□□ -0.26
PHGDH-233ENST00000642021 BMP4P12644 408 aa13.44□□□□□ -0.26
PHGDH-233ENST00000642021 JUNDP17535 347 aa13.44□□□□□ -0.26
PHGDH-233ENST00000642021 PLD1Q13393 1074 aa13.44□□□□□ -0.26
PHGDH-233ENST00000642021 CLCA4Q14CN2 919 aa13.44□□□□□ -0.26
PHGDH-233ENST00000642021 ACOX1Q15067 660 aa13.44□□□□□ -0.26
PHGDH-233ENST00000642021 CAPN13Q6MZZ7 669 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-233ENST00000642021 NXPE1Q8N323 547 aa13.44□□□□□ -0.26
PHGDH-233ENST00000642021 MFSD4AQ8N468 514 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms