RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 NDC1Q9BTX1 674 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 TXLNGQ9NUQ3 528 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 TCFL5Q9UL49 500 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 SNX7Q9UNH6 387 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 HEMK1Q9Y5R4 338 aaPredicted RBP17.01■□□□□ 0.31
PTPN11-207ENST00000639857 TEX264Q9Y6I9 313 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 MDC1Q14676 2089 aaKnown RBP17.01■□□□□ 0.31
PTPN11-207ENST00000639857 CCDC88CQ9P219 2028 aa17.01■□□□□ 0.31
PTPN11-207ENST00000639857 SRPX2O60687 465 aaPredicted RBP17■□□□□ 0.31
PTPN11-207ENST00000639857 RFPL1O75677 317 aa17■□□□□ 0.31
PTPN11-207ENST00000639857 ERVK-10P10266 1014 aa17■□□□□ 0.31
PTPN11-207ENST00000639857 CMPK1P30085 196 aa17■□□□□ 0.31
PTPN11-207ENST00000639857 GRIA3P42263 894 aa17■□□□□ 0.31
PTPN11-207ENST00000639857 ITGA8P53708 1063 aa17■□□□□ 0.31
PTPN11-207ENST00000639857 IL10RAQ13651 578 aa17■□□□□ 0.31
PTPN11-207ENST00000639857 PTCHD3Q3KNS1 767 aa17■□□□□ 0.31
PTPN11-207ENST00000639857 FCRL6Q6DN72 434 aa17■□□□□ 0.31
PTPN11-207ENST00000639857 C2orf73Q8N5S3 287 aaPredicted RBP17■□□□□ 0.31
PTPN11-207ENST00000639857 ADAMTS17Q8TE56 1095 aa17■□□□□ 0.31
PTPN11-207ENST00000639857 TRIM51Q9BSJ1 452 aa17■□□□□ 0.31
PTPN11-207ENST00000639857 SPRTNQ9H040 489 aaPredicted RBP17■□□□□ 0.31
PTPN11-207ENST00000639857 IRAK4Q9NWZ3 460 aa17■□□□□ 0.31
PTPN11-207ENST00000639857 TAS2R13Q9NYV9 303 aa17■□□□□ 0.31
PTPN11-207ENST00000639857 ZC3H7BQ9UGR2 993 aaKnown RBP17■□□□□ 0.31
PTPN11-207ENST00000639857 TRMT6Q9UJA5 497 aaKnown RBP17■□□□□ 0.31
PTPN11-207ENST00000639857 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17■□□□□ 0.31
PTPN11-207ENST00000639857 FAM187AA6NFU0 413 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 EFCAB8A8MWE9 144 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 E7ESA3 106 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 MKRN2OSH3BPM6 223 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 TP73O15350 636 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 ZBTB14O43829 449 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 BANF1O75531 89 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 CCNDBP1O95273 360 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 ELK3P41970 407 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 RGS4P49798 205 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 RPS18P62269 152 aaKnown RBP16.99■□□□□ 0.31
PTPN11-207ENST00000639857 ETF1P62495 437 aaKnown RBP16.99■□□□□ 0.31
PTPN11-207ENST00000639857 DCDP81605 110 aaKnown RBP16.99■□□□□ 0.31
PTPN11-207ENST00000639857 SP140Q13342 867 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 CUL1Q13616 776 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 GRM7Q14831 915 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 LCN10Q6JVE6 187 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 RNF44Q7L0R7 432 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 IGDCC3Q8IVU1 814 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 FAM20CQ8IXL6 584 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 ZNF655Q8N720 491 aaPredicted RBP16.99■□□□□ 0.31
PTPN11-207ENST00000639857 KRT12Q99456 494 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 PKP4Q99569 1192 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 UTP6Q9NYH9 597 aaKnown RBP16.99■□□□□ 0.31
PTPN11-207ENST00000639857 TSR3Q9UJK0 312 aaKnown RBP16.99■□□□□ 0.31
PTPN11-207ENST00000639857 CHMP2BQ9UQN3 213 aa16.99■□□□□ 0.31
PTPN11-207ENST00000639857 HELZ2Q9BYK8 2649 aaKnown RBP16.98■□□□□ 0.31
PTPN11-207ENST00000639857 A0A1B0GX78 115 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 OR2A25A4D2G3 310 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 FITM1A5D6W6 292 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 SLC16A8O95907 504 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 ONECUT2O95948 504 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 C8GP07360 202 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 PSMB5P28074 263 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 RPA3P35244 121 aaPredicted RBP16.98■□□□□ 0.31
PTPN11-207ENST00000639857 PNLIPRP1P54315 467 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 RELAQ04206 551 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 ILF2Q12905 390 aaKnown RBP16.98■□□□□ 0.31
PTPN11-207ENST00000639857 TEDDM1Q5T9Z0 273 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 CYHR1Q6ZMK1 362 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 MAATS1Q7Z4T9 603 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 RAB43Q86YS6 212 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 CPNE9Q8IYJ1 553 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 FKBP10Q96AY3 582 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 ABHD17AQ96GS6 310 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 IP6K3Q96PC2 410 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 MIPEPQ99797 713 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 SELENOSQ9BQE4 189 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 PLAC1Q9HBJ0 212 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 GPN3Q9UHW5 284 aaPredicted RBP16.98■□□□□ 0.31
PTPN11-207ENST00000639857 KLHL20Q9Y2M5 609 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 BSNQ9UPA5 3926 aa16.98■□□□□ 0.31
PTPN11-207ENST00000639857 MED13Q9UHV7 2174 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 KRT87PA6NCN2 255 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 SLC16A5O15375 505 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 AHSGP02765 367 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 F7P08709 466 aaPredicted RBP16.97■□□□□ 0.31
PTPN11-207ENST00000639857 PIM1P11309 404 aaPredicted RBP16.97■□□□□ 0.31
PTPN11-207ENST00000639857 GABRB3P28472 473 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 CASQ1P31415 396 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 RPL21P46778 160 aaKnown RBP16.97■□□□□ 0.31
PTPN11-207ENST00000639857 CARSP49589 748 aaKnown RBP16.97■□□□□ 0.31
PTPN11-207ENST00000639857 ABATP80404 500 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 FASTKQ14296 549 aaKnown RBP16.97■□□□□ 0.31
PTPN11-207ENST00000639857 FAM214AQ32MH5 1076 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 LACTB2Q53H82 288 aaPredicted RBP16.97■□□□□ 0.31
PTPN11-207ENST00000639857 TCTN3Q6NUS6 607 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 ATG14Q6ZNE5 492 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 TTC29Q8NA56 475 aaPredicted RBP16.97■□□□□ 0.31
PTPN11-207ENST00000639857 SPATA4Q8NEY3 305 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 ZNF480Q8WV37 535 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 CFAP36Q96G28 342 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 NDNQ99608 321 aa16.97■□□□□ 0.31
PTPN11-207ENST00000639857 WDR83Q9BRX9 315 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms