RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 MLLT10P55197 1068 aa12.24□□□□□ -0.45
CTSD-208ENST00000636843 TMTC4Q5T4D3 741 aa12.24□□□□□ -0.45
CTSD-208ENST00000636843 ARMC6Q6NXE6 501 aa12.24□□□□□ -0.45
CTSD-208ENST00000636843 FAM47EQ6ZV65 393 aa12.24□□□□□ -0.45
CTSD-208ENST00000636843 OOSP2Q86WS3 158 aa12.24□□□□□ -0.45
CTSD-208ENST00000636843 IPMKQ8NFU5 416 aa12.24□□□□□ -0.45
CTSD-208ENST00000636843 OR2L2Q8NH16 312 aa12.24□□□□□ -0.45
CTSD-208ENST00000636843 PSMG3-AS1Q96PY0 264 aa12.24□□□□□ -0.45
CTSD-208ENST00000636843 FAM111AQ96PZ2 611 aa12.24□□□□□ -0.45
CTSD-208ENST00000636843 INSM2Q96T92 566 aaPredicted RBP12.24□□□□□ -0.45
CTSD-208ENST00000636843 AKIRIN1Q9H9L7 192 aaPredicted RBP12.24□□□□□ -0.45
CTSD-208ENST00000636843 LATS2Q9NRM7 1088 aa12.24□□□□□ -0.45
CTSD-208ENST00000636843 ZFATQ9P243 1243 aa12.24□□□□□ -0.45
CTSD-208ENST00000636843 FARSAQ9Y285 508 aaKnown RBP12.24□□□□□ -0.45
CTSD-208ENST00000636843 USH1CQ9Y6N9 552 aa12.24□□□□□ -0.45
CTSD-208ENST00000636843 HMX2A2RU54 273 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 GPR39O43194 453 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 BUD23O43709 281 aaKnown RBP12.23□□□□□ -0.45
CTSD-208ENST00000636843 TROVE2P10155 538 aaKnown RBP eCLIP12.23□□□□□ -0.45
CTSD-208ENST00000636843 ALDH3A1P30838 453 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 CA5AP35218 305 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 SERPINB4P48594 390 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 BMPR2Q13873 1038 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 ANKRD20A4Q4UJ75 823 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 MROH9Q5TGP6 573 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 FAM199XQ6PEV8 388 aaPredicted RBP12.23□□□□□ -0.45
CTSD-208ENST00000636843 CERS6Q6ZMG9 384 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 TMEM126BQ8IUX1 230 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 CCDC63Q8NA47 563 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 RAB3IL1Q8TBN0 382 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 ZNF669Q96BR6 464 aaPredicted RBP12.23□□□□□ -0.45
CTSD-208ENST00000636843 C12orf66Q96MD2 445 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 TBL1YQ9BQ87 522 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 FSD1LQ9BXM9 530 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 TRIM55Q9BYV6 548 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 WWP1Q9H0M0 922 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 KIR3DX1Q9H7L2 352 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 PIH1D1Q9NWS0 290 aaKnown RBP12.23□□□□□ -0.45
CTSD-208ENST00000636843 NSMCE4AQ9NXX6 385 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 BTRCQ9Y297 605 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 PCDHGA9Q9Y5G4 932 aaKnown RBP12.23□□□□□ -0.45
CTSD-208ENST00000636843 HEBP2Q9Y5Z4 205 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 CFAP20Q9Y6A4 193 aaKnown RBP12.23□□□□□ -0.45
CTSD-208ENST00000636843 COLEC10Q9Y6Z7 277 aa12.23□□□□□ -0.45
CTSD-208ENST00000636843 USP9YO00507 2555 aaPredicted RBP12.23□□□□□ -0.45
CTSD-208ENST00000636843 ZCWPW2A0A1B0GU75 182 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 OR6C74A6NCV1 312 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 C2orf81A6NN90 581 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 GLRA3O75311 464 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 SCRG1O75711 98 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 DNAJC8O75937 253 aaPredicted RBP12.22□□□□□ -0.45
CTSD-208ENST00000636843 DNAJB5O75953 348 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 PRAMEF1O95521 474 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 PDGFAP04085 211 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 KLK3P07288 261 aaPredicted RBP12.22□□□□□ -0.45
CTSD-208ENST00000636843 SLC35G4P0C7Q5 338 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 NEFHP12036 1026 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 LPOP22079 712 aaPredicted RBP12.22□□□□□ -0.45
CTSD-208ENST00000636843 NDUFS1P28331 727 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 SPRP35270 261 aaPredicted RBP12.22□□□□□ -0.45
CTSD-208ENST00000636843 SCTRP47872 440 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 PGDP52209 483 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 CSE1LP55060 971 aaKnown RBP12.22□□□□□ -0.45
CTSD-208ENST00000636843 RPS18P62269 152 aaKnown RBP12.22□□□□□ -0.45
CTSD-208ENST00000636843 LAMB3Q13751 1172 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 TAF1AQ15573 450 aaPredicted RBP12.22□□□□□ -0.45
CTSD-208ENST00000636843 BCL7AQ4VC05 210 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 ZNF517Q6ZMY9 492 aaPredicted RBP12.22□□□□□ -0.45
CTSD-208ENST00000636843 DET1Q7L5Y6 550 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 OTOAQ7RTW8 1153 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 RP1L1Q8IWN7 2480 aaPredicted RBP12.22□□□□□ -0.45
CTSD-208ENST00000636843 EFCAB3Q8N7B9 438 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 MR1Q95460 341 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 ZNF501Q96CX3 271 aaPredicted RBP12.22□□□□□ -0.45
CTSD-208ENST00000636843 LINC00615Q96LM1 132 aaPredicted RBP12.22□□□□□ -0.45
CTSD-208ENST00000636843 LRFN5Q96NI6 719 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 CCM2Q9BSQ5 444 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 SLC25A23Q9BV35 468 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 KIFC1Q9BW19 673 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 SLCO1B3Q9NPD5 702 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 ABCF3Q9NUQ8 709 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 PCMTD2Q9NV79 361 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 SLC12A4Q9UP95 1085 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 CAPN7Q9Y6W3 813 aa12.22□□□□□ -0.45
CTSD-208ENST00000636843 WDR91A4D1P6 747 aa12.21□□□□□ -0.45
CTSD-208ENST00000636843 TTLL8A6PVC2 850 aa12.21□□□□□ -0.45
CTSD-208ENST00000636843 H0YHG0 523 aa12.21□□□□□ -0.45
CTSD-208ENST00000636843 MATN2O00339 956 aa12.21□□□□□ -0.45
CTSD-208ENST00000636843 BIRC5O15392 142 aa12.21□□□□□ -0.45
CTSD-208ENST00000636843 VPS4BO75351 444 aa12.21□□□□□ -0.45
CTSD-208ENST00000636843 DCTN3O75935 186 aa12.21□□□□□ -0.45
CTSD-208ENST00000636843 TGDSO95455 350 aa12.21□□□□□ -0.45
CTSD-208ENST00000636843 RAB40ALP0C0E4 278 aa12.21□□□□□ -0.45
CTSD-208ENST00000636843 KPNA2P52292 529 aaKnown RBP12.21□□□□□ -0.45
CTSD-208ENST00000636843 PRKAA1Q13131 559 aa12.21□□□□□ -0.45
CTSD-208ENST00000636843 OLIG2Q13516 323 aa12.21□□□□□ -0.45
CTSD-208ENST00000636843 KRT33BQ14525 404 aa12.21□□□□□ -0.45
CTSD-208ENST00000636843 GPR19Q15760 415 aa12.21□□□□□ -0.45
CTSD-208ENST00000636843 PCID2Q5JVF3 399 aa12.21□□□□□ -0.45
CTSD-208ENST00000636843 ATG16L1Q676U5 607 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms