RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 GBA3Q9H227 469 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 LHX5Q9H2C1 402 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 RPL36Q9Y3U8 105 aaKnown RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 SH3PXD2BA1X283 911 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GJE1A6NN92 205 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 DISC1C4P0D8 188 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 RNF13O43567 381 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 DUSP11O75319 330 aaKnown RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GLRA2P23416 452 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 MAPK3P27361 379 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 SLC5A3P53794 718 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 TLE2Q04725 743 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 TMCO2Q7Z6W1 182 aaPredicted RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ZNF280BQ86YH2 543 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 WDSUB1Q8N9V3 476 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 PHOSPHO1Q8TCT1 267 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 KCNN1Q92952 543 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 RELTQ969Z4 430 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 ZFP3Q96NJ6 502 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CASD1Q96PB1 797 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 TXN2Q99757 166 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 RIOK2Q9BVS4 552 aaKnown RBP5.44□□□□□ -1.54
SCN1A-209ENST00000635750 GRHL1Q9NZI5 618 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CARD8Q9Y2G2 431 aa5.44□□□□□ -1.54
SCN1A-209ENST00000635750 CLDN25C9JDP6 229 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ENPP3O14638 875 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 IRAK2O43187 625 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 RCBTB2O95199 551 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 APOL3O95236 402 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 EPCAMP16422 314 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 HK1P19367 917 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ENDOUP21128 410 aaKnown RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SLC6A6P31641 620 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 UQCRC1P31930 480 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 BMP8BP34820 402 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 HSPA7P48741 367 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 MLLT6P55198 1093 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 DNASE1L3Q13609 305 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ARSIQ5FYB1 569 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 KDELC1Q6UW63 502 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 LINGO4Q6UY18 593 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 BMP8AQ7Z5Y6 402 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 CLPTM1LQ96KA5 538 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TM9SF3Q9HD45 589 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ADAP2Q9NPF8 381 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 GTF2IRD1Q9UHL9 959 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 POFUT2Q9Y2G5 429 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PLA2R1Q13018 1463 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PIP5K1BO14986 540 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PAPSS1O43252 624 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 BRINP1O60477 761 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ENTPD6O75354 484 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 EPHA3P29320 983 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 THBS2P35442 1172 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 CBLBQ13191 982 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 DSG2Q14126 1118 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TAF1AQ15573 450 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 EML3Q32P44 896 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 GDPD4Q6W3E5 623 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 FRMD7Q6ZUT3 714 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 LINC00471Q8N535 108 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 BOLLQ8N9W6 283 aaKnown RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 DNAJB8Q8NHS0 232 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ELP5Q8TE02 316 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 BAP1Q92560 729 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 RCN3Q96D15 328 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ZSCAN5AQ9BUG6 496 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SYT4Q9H2B2 425 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 BLOC1S4Q9NUP1 217 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 HCN2Q9UL51 889 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 FAM237BA0A1B0GVD1 139 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TMEM150BA6NC51 233 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ANKRD28O15084 1053 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ZMPSTE24O75844 475 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 AHSA1O95433 338 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 CBX6O95503 412 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ANGPTL1O95841 491 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 JUPP14923 745 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PFKLP17858 780 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 AFF1P51825 1210 aaKnown RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 FOLH1Q04609 750 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 RFTN1Q14699 578 aaPredicted RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 ELOCQ15369 112 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 DHCR24Q15392 516 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 SYT16Q17RD7 645 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 INTS5Q6P9B9 1019 aaKnown RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 LANCL3Q6ZV70 420 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 NUDT13Q86X67 352 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 OR2T34Q8NGX1 318 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 OR2T3Q8NH03 318 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 COPS5Q92905 334 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 RBP7Q96R05 134 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 NUDT15Q9NV35 164 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 KCNIP1Q9NZI2 227 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 PCDHGA2Q9Y5H1 932 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 LRRC7Q96NW7 1537 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 CCDC163A0A0D9SF12 145 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 FABP12A6NFH5 140 aa5.43□□□□□ -1.54
SCN1A-209ENST00000635750 MSI1O43347 362 aaKnown RBP5.43□□□□□ -1.54
SCN1A-209ENST00000635750 TRMUO75648 421 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms