RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 OR4C6Q8NH72 309 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 RFWD2Q8NHY2 731 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 PPP4R1Q8TF05 950 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 SETD7Q8WTS6 366 aaKnown RBP13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 LCN9Q8WX39 176 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 SREK1Q8WXA9 508 aaKnown RBP13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 THOC1Q96FV9 657 aaKnown RBP13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 KCNA7Q96RP8 456 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 NTMT1Q9BV86 223 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 NUSAP1Q9BXS6 441 aaKnown RBP13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 UCK1Q9HA47 277 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 KCNK13Q9HB14 408 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 MID1IP1Q9NPA3 183 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 RXFP3Q9NSD7 469 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 NLGN3Q9NZ94 848 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 LNPEPQ9UIQ6 1025 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 GMEB2Q9UKD1 530 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 RNF11Q9Y3C5 154 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 RNF215Q9Y6U7 377 aa13.73□□□□□ -0.21
PHACTR4-209ENST00000633371 MUC6Q6W4X9 2439 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 IGKV1-8A0A0C4DH67 115 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 LNP1A1A4G5 178 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 PABPN1LA6NDY0 278 aaKnown RBP13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 E7EQ34 232 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 CDX4O14627 284 aaPredicted RBP13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 YKT6O15498 198 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 SIGLEC6O43699 453 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 PCDHGA12O60330 932 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 WFS1O76024 890 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 CER1O95813 267 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 JUNP05412 331 aaKnown RBP13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 FGF4P08620 206 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 CHRM5P08912 532 aaPredicted RBP13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 ZNF806P0C7X5 589 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 EPB42P16452 691 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 TGM1P22735 817 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 SHMT2P34897 504 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 NBL1P41271 181 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 CASP2P42575 452 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 PKNOX1P55347 436 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 NAA20P61599 178 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 SF3A3Q12874 501 aaKnown RBP eCLIP13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 CDC16Q13042 620 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 PRKAA1Q13131 559 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 RBBP7Q16576 425 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 PRAMEF13Q5VWM6 474 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 CLEC6AQ6EIG7 209 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 DBX2Q6ZNG2 339 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 GPRIN3Q6ZVF9 776 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 ZNF438Q7Z4V0 828 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 L3MBTL4Q8NA19 623 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 OR4F6Q8NGB9 312 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 NEIL2Q969S2 332 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 OR2A14Q96R47 310 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 CCT8L2Q96SF2 557 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 PRRX2Q99811 253 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 GTPBP2Q9BX10 602 aaKnown RBP13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 ILKAPQ9H0C8 392 aaPredicted RBP13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 SPNS1Q9H2V7 528 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 PARD6AQ9NPB6 346 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 CCDC177Q9NQR7 707 aaPredicted RBP13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 ABCF3Q9NUQ8 709 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 PSD3Q9NYI0 1048 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 OR6C2Q9NZP2 312 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 MARCOQ9UEW3 520 aaPredicted RBP13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 BTBD3Q9Y2F9 522 aa13.72□□□□□ -0.21
PHACTR4-209ENST00000633371 OR6C74A6NCV1 312 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 KATNA1O75449 491 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 ESRRBO95718 433 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 MLYCDO95822 493 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 KITP10721 976 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 VARSP26640 1264 aaKnown RBP13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 SERPINB3P29508 390 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 LSSP48449 732 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 RPL14P50914 215 aaKnown RBP13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 PPP1CAP62136 330 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 TSTA3Q13630 321 aaPredicted RBP13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 DOC2AQ14183 400 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 TCHHL1Q5QJ38 904 aaPredicted RBP13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 CATSPEREQ5SY80 951 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 PIGWQ7Z7B1 504 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 CRLF3Q8IUI8 442 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 WDR75Q8IWA0 830 aaKnown RBP13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 RBM12BQ8IXT5 1001 aaKnown RBP13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 EID2Q8N6I1 236 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 ARL10Q8N8L6 244 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 FAM181AQ8N9Y4 354 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 AGR3Q8TD06 166 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 RSC1A1Q92681 617 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 WDR34Q96EX3 536 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 APOLD1Q96LR9 279 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 PPM1MQ96MI6 270 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 ACAT2Q9BWD1 397 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 RAB11FIP5Q9BXF6 653 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 SRMSQ9H3Y6 488 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 TUBB1Q9H4B7 451 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 SLC6A20Q9NP91 592 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 DNAAF2Q9NVR5 837 aaKnown RBP13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 CUEDC1Q9NWM3 386 aaPredicted RBP13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 TAC3Q9UHF0 121 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms