RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	RLF	Q13129	1914 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891		A0A087WV48	116 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891		A0A0U1RQK1	487 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	ZNF320	A2RRD8	509 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	HS3ST1	O14792	307 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	SPINT2	O43291	252 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	TSPAN1	O60635	241 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	PRSS2	P07478	247 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	HNF4A	P41235	474 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	LIMK1	P53667	647 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	HNRNPH2	P55795	449 aa	Known RBP	5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	DYNLL1	P63167	89 aa	Known RBP	5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	UBXN1	Q04323	297 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	SPOCK1	Q08629	439 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	KIF5A	Q12840	1032 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	HSPB3	Q12988	150 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	TUBB2A	Q13885	445 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	OASL	Q15646	514 aa	Known RBP	5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	CAVIN4	Q5BKX8	364 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	XKR9	Q5GH70	373 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	MPP7	Q5T2T1	576 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	SFMBT2	Q5VUG0	894 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	FKBP1C	Q5VVH2	108 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	PAPD4	Q6PIY7	484 aa	Known RBP	5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	MOXD1	Q6UVY6	613 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	DET1	Q7L5Y6	550 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	RBM23	Q86U06	439 aa	Known RBP	5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	SPATA2L	Q8IUW3	424 aa	Predicted RBP	5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	SIX6OS1	Q8N1H7	587 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	BEST3	Q8N1M1	668 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	ANKRD13C	Q8N6S4	541 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	C10orf53	Q8N6V4	93 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	OR2AK2	Q8NG84	335 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	SPATA22	Q8NHS9	363 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	TMED6	Q8WW62	240 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	KCNE4	Q8WWG9	221 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	APBB2	Q92870	758 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	ERLEC1	Q96DZ1	483 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	SCMH1	Q96GD3	660 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	GRAMD2B	Q96HH9	432 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	LINC00615	Q96LM1	132 aa	Predicted RBP	5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	RMDN2	Q96LZ7	410 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	MLPH	Q9BV36	600 aa	Predicted RBP	5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	TUBB2B	Q9BVA1	445 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	MOV10L1	Q9BXT6	1211 aa	Known RBP	5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	CNOT10	Q9H9A5	744 aa	Known RBP	5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	WWOX	Q9NZC7	414 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	ACAD8	Q9UKU7	415 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	LIPT1	Q9Y234	373 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	KLHL20	Q9Y2M5	609 aa		5.5	□□□□□ -1.53
NRXN1-223	ENST00000625891	PFAS	O15067	1338 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891		A0A1B0GUL7	405 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	OR6C76	A6NM76	312 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891		H0YAE9	185 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	SLCO2B1	O94956	709 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	EGF	P01133	1207 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	PENK	P01210	267 aa	Predicted RBP	5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	FCGR1A	P12314	374 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	PSMA3	P25788	255 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	CCND3	P30281	292 aa	Predicted RBP	5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	ATP6V1E1	P36543	226 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	ALDH3A2	P51648	485 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	HMGCS2	P54868	508 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	CDH13	P55290	713 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	SEC61B	P60468	96 aa	Known RBP	5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	SEC61A1	P61619	476 aa	Known RBP	5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	YWHAH	Q04917	246 aa	Predicted RBP	5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	RBPJ	Q06330	500 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	GAGE2B	Q13066	116 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	SPP2	Q13103	211 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	DECR1	Q16698	335 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	MEP1A	Q16819	746 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	TYSND1	Q2T9J0	566 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	MYLK3	Q32MK0	819 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	GLIPR1L2	Q4G1C9	344 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	GAGE2E	Q4V326	116 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	ATP13A5	Q4VNC0	1218 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	GAGE2A	Q6NT46	116 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	SLC36A4	Q6YBV0	504 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	MEPCE	Q7L2J0	689 aa	Known RBP	5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	PIWIL3	Q7Z3Z3	882 aa	Known RBP	5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	SPATA19	Q7Z5L4	167 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	TMEM173	Q86WV6	379 aa	Predicted RBP	5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	NRROS	Q86YC3	692 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	TIGD4	Q8IY51	512 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	ARL10	Q8N8L6	244 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	PAPD5	Q8NDF8	572 aa	Known RBP	5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	RAET1E	Q8TD07	263 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	MAGEC3	Q8TD91	643 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	TAS1R2	Q8TE23	839 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	ROBO4	Q8WZ75	1007 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	MR1	Q95460	341 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	RHBDF1	Q96CC6	855 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	CSF3R	Q99062	836 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	KXD1	Q9BQD3	176 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	ZPBP	Q9BS86	351 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	IDI2	Q9BXS1	227 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	PORCN	Q9H237	461 aa		5.49	□□□□□ -1.53
NRXN1-223	ENST00000625891	PPIL3	Q9H2H8	161 aa	Known RBP	5.49	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms