RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 CSTF2P33240 577 aaKnown RBP eCLIP6.85□□□□□ -1.31
PSMB3-212ENST00000620309 CCT5P48643 541 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 AP1S2P56377 157 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 WDR4P57081 412 aaKnown RBP6.85□□□□□ -1.31
PSMB3-212ENST00000620309 TARDBPQ13148 414 aaKnown RBP eCLIP6.85□□□□□ -1.31
PSMB3-212ENST00000620309 GPS2Q13227 327 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 CAMK2BQ13554 666 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 NR1D2Q14995 579 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 TGFBIQ15582 683 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 RPE65Q16518 533 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 AMZ1Q400G9 498 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 CCDC153Q494R4 210 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 PERM1Q5SV97 790 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.85□□□□□ -1.31
PSMB3-212ENST00000620309 C16orf46Q6P387 395 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 ZYG11AQ6WRX3 759 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 FRA10AC1Q70Z53 315 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 UBE2R2Q712K3 238 aaPredicted RBP6.85□□□□□ -1.31
PSMB3-212ENST00000620309 TBC1D21Q8IYX1 336 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 PHC3Q8NDX5 983 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 ARMC2Q8NEN0 867 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 OR4D9Q8NGE8 314 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 WDR36Q8NI36 951 aaKnown RBP6.85□□□□□ -1.31
PSMB3-212ENST00000620309 SKA2Q8WVK7 121 aaPredicted RBP6.85□□□□□ -1.31
PSMB3-212ENST00000620309 TFGQ92734 400 aaPredicted RBP6.85□□□□□ -1.31
PSMB3-212ENST00000620309 EXT2Q93063 718 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 ZDHHC12Q96GR4 267 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 LIN37Q96GY3 246 aaPredicted RBP6.85□□□□□ -1.31
PSMB3-212ENST00000620309 TSNARE1Q96NA8 513 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 INSM2Q96T92 566 aaPredicted RBP6.85□□□□□ -1.31
PSMB3-212ENST00000620309 SELENOSQ9BQE4 189 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 TMEM79Q9BSE2 394 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 HGH1Q9BTY7 390 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 RAB11FIP5Q9BXF6 653 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 SLC12A9Q9BXP2 914 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 TRIT1Q9H3H1 467 aaKnown RBP6.85□□□□□ -1.31
PSMB3-212ENST00000620309 KIR3DX1Q9H7L2 352 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 MVB12BQ9H7P6 319 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 PARVBQ9HBI1 364 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 THSD1Q9NS62 852 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 SPATA7Q9P0W8 599 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 CPSF2Q9P2I0 782 aaKnown RBP6.85□□□□□ -1.31
PSMB3-212ENST00000620309 ZNF624Q9P2J8 865 aaPredicted RBP6.85□□□□□ -1.31
PSMB3-212ENST00000620309 COPG2Q9UBF2 871 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 POLG2Q9UHN1 485 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 MID2Q9UJV3 735 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 RNF112Q9ULX5 631 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 ASF1AQ9Y294 204 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 ASB1Q9Y576 335 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 PCDHB11Q9Y5F2 797 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 CFAP20Q9Y6A4 193 aaKnown RBP6.85□□□□□ -1.31
PSMB3-212ENST00000620309 U3KQA8 63 aa6.85□□□□□ -1.31
PSMB3-212ENST00000620309 MYO9AB2RTY4 2548 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 TRBV23OR9-2A0A075B6M9 112 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 IGHV1OR21-1A0A087WYE8 117 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 ZNF839A8K0R7 811 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 SYCE1LA8MT33 242 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 SUPT3HB4E1H0 165 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 STX16-NPEPL1H3BU86 382 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 NTN3O00634 580 aaPredicted RBP6.84□□□□□ -1.31
PSMB3-212ENST00000620309 STX16O14662 325 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 HGSO14964 777 aaPredicted RBP6.84□□□□□ -1.31
PSMB3-212ENST00000620309 RRP8O43159 456 aaKnown RBP6.84□□□□□ -1.31
PSMB3-212ENST00000620309 SUPT3HO75486 399 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 RASSF9O75901 435 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 SLC16A8O95907 504 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 RPS17P08708 135 aaKnown RBP6.84□□□□□ -1.31
PSMB3-212ENST00000620309 MYF5P13349 255 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 CHN1P15882 459 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 SHMT2P34897 504 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 SLC19A1P41440 591 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 CAPZBP47756 277 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 SLC6A12P48065 614 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 KCNC1P48547 511 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 SERPINB4P48594 390 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 ARL4DP49703 201 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 RAB15P59190 212 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 TBPL1P62380 186 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 GABREP78334 506 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 CCL7P80098 99 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 GPR18Q14330 331 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 SETDB1Q15047 1291 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 ISXQ2M1V0 245 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 ZXDCQ2QGD7 858 aaPredicted RBP6.84□□□□□ -1.31
PSMB3-212ENST00000620309 C3orf38Q5JPI3 329 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 CDKL4Q5MAI5 379 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 CDCP2Q5VXM1 449 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 TMEM71Q6P5X7 295 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 FOXR1Q6PIV2 292 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 WDR74Q6RFH5 385 aaPredicted RBP6.84□□□□□ -1.31
PSMB3-212ENST00000620309 LRRC69Q6ZNQ3 347 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 TMEM26Q6ZUK4 368 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 KLHDC8AQ8IYD2 350 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 LRRC56Q8IYG6 542 aaPredicted RBP6.84□□□□□ -1.31
PSMB3-212ENST00000620309 ANKRD42Q8N9B4 389 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 OR52E1Q8NGJ3 308 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 OR6Y1Q8NGX8 325 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 HMGCLL1Q8TB92 370 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 STAG3L4Q8TBR4 150 aa6.84□□□□□ -1.31
PSMB3-212ENST00000620309 RHBDF1Q96CC6 855 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms