RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 FSHRP23945 695 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 RGS4P49798 205 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 DPY19L1Q2PZI1 675 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 ADAMTSL2Q86TH1 951 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 MFSD4AQ8N468 514 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 ZBTB2Q8N680 514 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 OR7A2PQ8NGA2 310 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 ECHDC3Q96DC8 303 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 NUDT4Q9NZJ9 180 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 ZMYM5Q9UJ78 669 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 GPSM3Q9Y4H4 160 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 MTCL1Q9Y4B5 1905 aaKnown RBP16.06■□□□□ 0.16
CNOT3-208ENST00000613073 POP4O95707 220 aaKnown RBP16.06■□□□□ 0.16
CNOT3-208ENST00000613073 HTR1AP08908 422 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 CAPN3P20807 821 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 RPS3P23396 243 aaKnown RBP eCLIP16.06■□□□□ 0.16
CNOT3-208ENST00000613073 CRHBPP24387 322 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 PPP1R8Q12972 351 aaKnown RBP16.06■□□□□ 0.16
CNOT3-208ENST00000613073 PPIGQ13427 754 aaKnown RBP eCLIP16.06■□□□□ 0.162e-6■■□□□ 11.8
CNOT3-208ENST00000613073 HABP4Q5JVS0 413 aaKnown RBP16.06■□□□□ 0.16
CNOT3-208ENST00000613073 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.06■□□□□ 0.167e-7■■■■■ 28.7
CNOT3-208ENST00000613073 MBOAT1Q6ZNC8 495 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 GOLGA7Q7Z5G4 137 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 ADIPOR2Q86V24 386 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 PNPT1Q8TCS8 783 aaKnown RBP16.06■□□□□ 0.16
CNOT3-208ENST00000613073 PDLIM5Q96HC4 596 aaKnown RBP16.06■□□□□ 0.16
CNOT3-208ENST00000613073 MAGED4Q96JG8 741 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 CNDP2Q96KP4 475 aaKnown RBP16.06■□□□□ 0.16
CNOT3-208ENST00000613073 TEX37Q96LM6 180 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 NEK6Q9HC98 313 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 ELOVL2Q9NXB9 296 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 B4GALT6Q9UBX8 382 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 MBD1Q9UIS9 605 aaPredicted RBP16.06■□□□□ 0.16
CNOT3-208ENST00000613073 PNMA8BQ9ULN7 279 aaPredicted RBP16.06■□□□□ 0.16
CNOT3-208ENST00000613073 SZT2Q5T011 3432 aa16.06■□□□□ 0.16
CNOT3-208ENST00000613073 TNFRSF10AO00220 468 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 ANGPT2O15123 496 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 ASNA1O43681 348 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 DEAF1O75398 565 aaPredicted RBP16.05■□□□□ 0.16
CNOT3-208ENST00000613073 ARHGEF15O94989 841 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 CAPN1P07384 714 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 TCF3P15923 654 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 JUNBP17275 347 aaPredicted RBP16.05■□□□□ 0.16
CNOT3-208ENST00000613073 SYN1P17600 705 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 TGFBR1P36897 503 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 ATP4BP51164 291 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 E2F2Q14209 437 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 CTF1Q16619 201 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 ANKRD34AQ69YU3 496 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 STK32CQ86UX6 486 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 ARMC8Q8IUR7 673 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 ZNF366Q8N895 744 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 METTL6Q8TCB7 284 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 ZUFSPQ96AP4 578 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 ISG20Q96AZ6 181 aaKnown RBP16.05■□□□□ 0.16
CNOT3-208ENST00000613073 ENPP5Q9UJA9 477 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 HELZP42694 1942 aaKnown RBP16.05■□□□□ 0.16
CNOT3-208ENST00000613073 RAD51BO15315 384 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 MTX2O75431 263 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 CHRNB1P11230 501 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 DGKAP23743 735 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 HTR6P50406 440 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 IST1P53990 364 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 GTF2H2Q13888 395 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 DGCR6Q14129 220 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 GPRC6AQ5T6X5 926 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 GTF2H2CQ6P1K8 395 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 C8orf82Q6P1X6 216 aaPredicted RBP16.05■□□□□ 0.16
CNOT3-208ENST00000613073 OR2A12Q8NGT7 310 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 DACH2Q96NX9 599 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 LYSMD1Q96S90 227 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 HTATIP2Q9BUP3 242 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 FAM126AQ9BYI3 521 aaPredicted RBP16.05■□□□□ 0.16
CNOT3-208ENST00000613073 PCDHGA8Q9Y5G5 932 aa16.05■□□□□ 0.16
CNOT3-208ENST00000613073 TTC34A8MYJ7 566 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 TAF4O00268 1085 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 NUAK1O60285 661 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 UGT2B11O75310 529 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 PIK3CGP48736 1102 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 EPHA5P54756 1037 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 TUBA3CQ13748 450 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 CAMK1Q14012 370 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 GPR33Q49SQ1 333 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 RSBN1Q5VWQ0 802 aaPredicted RBP16.04■□□□□ 0.16
CNOT3-208ENST00000613073 POC5Q8NA72 575 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 OR4F6Q8NGB9 312 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 VPS33AQ96AX1 596 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 TMEM74Q96NL1 305 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 TMEM106CQ9BVX2 250 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 IPPKQ9H8X2 491 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 SDR39U1Q9NRG7 319 aaPredicted RBP16.04■□□□□ 0.16
CNOT3-208ENST00000613073 ACTR3BQ9P1U1 418 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 ANAPC2Q9UJX6 822 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 PCDHB3Q9Y5E6 796 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 TRANK1O15050 2925 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 OR7A17O14581 309 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 TAPBPO15533 448 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 TBX1O43435 398 aa16.04■□□□□ 0.16
CNOT3-208ENST00000613073 EIF2S1P05198 315 aaKnown RBP16.04■□□□□ 0.16
CNOT3-208ENST00000613073 C1SP09871 688 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms